Gene Cpin_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2827 
Symbol 
ID8358988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3484419 
End bp3485042 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID644965007 
Producthypothetical protein 
Protein accessionYP_003122507 
Protein GI256421854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATC TTTGTACCGT TTTTTTAAGT AATTTAAAGT ATATGACCTT TACGGAATAC 
CAGGCGCTAT TTGACGATAT ATTATCAAAG AGCGCTGAAG AACATACCGC ACCATACAAC
AATCATGCAT ATCTTGAATA TGTGAAGCTG AACCGTTCAC GCATGAGCCG CTGGTTTAAA
ACAGGGAAAC TGTCTTCTAA ACTGACTGAA CTAGTCGAAA AAATTACAAC ACCTCAGCAA
TGGGTCGTGA TTACCGAAGC CTGGTGTGGT GACGCCTCAC ATAGTGTACC TTTCATGAAA
ATGATGGCGG ACCTGAATCC TTTGATCGAC CTGTCATTTG AATTAAGAGA CAGCCAGCCA
TATAACATCG AGCATTACCT GACCAACGGA ACCCGGTCCA TCCCCAAGTT AGTGGTACGG
GATGCGGATG GAAAAGACAT CGGCACCTGG GGACCACGTC CCAAGGACTG TCAGATCATG
TATAAAACCT TGTTGAGCAA CCAGGCATCT TCTGAAACGA TCAAGATCGA GATGCAAAAC
TGGTACAACA ATAATAAAGG TGTTGACATA CAGGAAGAAT TGTACGAGAT GTTAAGCATG
GCACTGCAAC AGCAGGAAGC CTAA
 
Protein sequence
MQDLCTVFLS NLKYMTFTEY QALFDDILSK SAEEHTAPYN NHAYLEYVKL NRSRMSRWFK 
TGKLSSKLTE LVEKITTPQQ WVVITEAWCG DASHSVPFMK MMADLNPLID LSFELRDSQP
YNIEHYLTNG TRSIPKLVVR DADGKDIGTW GPRPKDCQIM YKTLLSNQAS SETIKIEMQN
WYNNNKGVDI QEELYEMLSM ALQQQEA