| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2789 |
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| Symbol | |
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| ID | 8358950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3434673 |
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| End bp | 3435560 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964969 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003122469 |
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| Protein GI | 256421816 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.221879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTATC CAGAATATTG CCCCCTGTTA AAGCTCGAAG ACGTAGACGC CAATCTGCCA
TTCCAGATCC GTACATTTAA AAATATGCGG GAAGAAATCA TCGCGCACAA TAGCTCACCG
CATAAACAAA ACTATATAGA GATCATCTGG ATCACAAAAG GAAGCGGTAC CCTGGTACTG
GACCTTGAAA TCTTCAAACT GGAAAGTAAC AGCATTTTTT GTATTACCCC CGGACAGTTA
CATCAGCTGA GAGAAGATGA AAGTACCGAA GGCTTTATAT TATCATTTAC CGAGGCATTC
CTGCACATGG GTGAACAGGA ATTTGACCTG ATGTATAATT CGGGGCTGTT CCAGGCGTTC
TCCCGTTCTG CAGGTATCAG CGTGAACAAC GATATCGCGA GAGAGATGCA GGAAGTTGCA
TTAAAAATGC TGAAGGAATG TAATAATGTC TATCTGTTCA AAACGGAGAT GCTACGCCGT
TATCTGAAAA TCTTCCTGAT TTATGTTACC CGCCAGTTTC AGGGACCATT GACCACCGTT
ATTCAGACGC GTAACCTGGA GCTGACGGAG AAGTTTAAAT CCCTCGTAGA AGTTAATTTC
AAAACACACC GGAAAGTAGC TGATTATGCG AAACTGCTGG CAGTAACCCC TAACTATCTC
AATGAGATCA TCAAAAAGAC GACTGCCTAT CCCGCGAGCT ATCATATCCG CCAGCGTATT
ATACTGGAAG CAAAAAGAAG GGTGGCCTAT TCCGATGAAT GTATGAAAGA AGTGGCCTGG
TATCTTGGTT TTTCTGACAT TGCGCACTTC AGCAAATTCT TCAAAAATGC AACCGGTATT
ACCTTCTCTG ATTTCAGAAA GGAATGCCTG GTTATCAGCC CCGCGTGA
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| Protein sequence | MKYPEYCPLL KLEDVDANLP FQIRTFKNMR EEIIAHNSSP HKQNYIEIIW ITKGSGTLVL
DLEIFKLESN SIFCITPGQL HQLREDESTE GFILSFTEAF LHMGEQEFDL MYNSGLFQAF
SRSAGISVNN DIAREMQEVA LKMLKECNNV YLFKTEMLRR YLKIFLIYVT RQFQGPLTTV
IQTRNLELTE KFKSLVEVNF KTHRKVADYA KLLAVTPNYL NEIIKKTTAY PASYHIRQRI
ILEAKRRVAY SDECMKEVAW YLGFSDIAHF SKFFKNATGI TFSDFRKECL VISPA
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