Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2767 |
Symbol | |
ID | 8358928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3392431 |
End bp | 3393345 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964947 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003122447 |
Protein GI | 256421794 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0012979 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAACA AGGACGTAAC TGAATTTGTC ATTGATTGTC TGACAGATAC CAGTAACAAG GACAAACAGG CTGCATTAAA CCAGTGGTTG CGGGAGTCGG AAGACAACCG CCTGCTGTAT GCAGAACTGA AGCAGCTTTG GGAAGCTGCC GCAGCAGTCC CCCCCGTGCC ATTTGACAGC GAACAAGGAT GGAATGAACT CCTGCTGGTG ATAGCAGCAG ATACGCCCGT AAAGCGCATG TTCCCCTGGA AAACAGTGGC CGCCGCTGTG TTGCTCCTGC TCCTGGGTAC AGGTATCTGG TGGTGGCAGA CAACTGCTGT CCGCTGGACC ACTTATATCG CTCACACCGC AGACCGGGAT AGTCTCTCGT TACCGGATGG TTCACTTGTA TATCTCAAAC CAGGTACCTC TCTGAAATAT AAACAACCCT TTTCTGACCG CACCGTTGTC CTCCTATCAG GCGAAGCATA TTTCGATGTA ATGAAAGCAG CCGAACATAT ATTTCTTGTA CAGGCAGGAG ATGCAACTGT GCGTGTATTA GGTACGGCAT TTAATGTGCG AATAGAACAG AATAGAACAG AGGTAATCGT GTTTGAAGGG AAAATAAGTT TACAACAGAA CGGGCAAAAT CTGGTACTCA GTAGTGGTGA TGGAAACAAG GGAACAGCAG ATGCTGCAAG TGGCGAAATC CTGCATCCAC AGGGTGATTA CAGCAACCAG TGTGTATGGG CTACAGATGA TTTGTTATTC GAAAATGAAG AAGCGGTACA CGTCGCAAAA GTGATCGCAG ATTACTATAA AATCCCTGCC TTAAAAATAC CTGAAAATCT AAAACATAAA CGTATTACCT TACACCTGCA TAACACGCCG GCCGAACAAG CTATGGAAAT CCTGGCGACC GTTTTAGATG AATAA
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Protein sequence | MNNKDVTEFV IDCLTDTSNK DKQAALNQWL RESEDNRLLY AELKQLWEAA AAVPPVPFDS EQGWNELLLV IAADTPVKRM FPWKTVAAAV LLLLLGTGIW WWQTTAVRWT TYIAHTADRD SLSLPDGSLV YLKPGTSLKY KQPFSDRTVV LLSGEAYFDV MKAAEHIFLV QAGDATVRVL GTAFNVRIEQ NRTEVIVFEG KISLQQNGQN LVLSSGDGNK GTADAASGEI LHPQGDYSNQ CVWATDDLLF ENEEAVHVAK VIADYYKIPA LKIPENLKHK RITLHLHNTP AEQAMEILAT VLDE
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