Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2760 |
Symbol | |
ID | 8358921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3385178 |
End bp | 3386335 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964940 |
Product | hypothetical protein |
Protein accession | YP_003122440 |
Protein GI | 256421787 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.120597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAA CCATCAATTC CCTCCTCCTT TGCATGACTA TGGCAGCTAT GGCCACTTTA TTATTTATGT GCAAAAAACA GGATCAGAAC AGCAATGCGC CATTGCTCAA CAAAAGTCTG ACAGCAGCAG CCGGAGTGGC GCCCGCTGTT TTTGTTCATC CGGGCGTGTT GAATACACAG GCCAGTCTGG ACCTGATCGG CTCGCAGGTC AACGGTGGCG AGGCCATACG TTCCGCCGCC TACCAGAAAG TACTGGATTT TGTCAATGGT AATGCTTTAC CGACAAAATT CTGGGAAACC GTTACCGTGG GTTCCAACGG AGCCACTACA GAATCCAAAA GCCAGATCAG AAAAGACGCC GTACTGGCGT ATGCACTGGC ACTCCGCTGG GCGAAAACCG GTACAGCAAC CTATGCACAA CAGTGCATTG CCATTCTGAA CGGCTGGTCC TACACGTTTA AACAATATGC GTTAATGGAC GGGGCTAACC AGTACCAGCC CTCCCTGGAA GCATCCTGGA CGACGCCCAG TTTTGTAGCA GCAGCAGAGA TCATACGCTA TTACAAAGCA TTCGGACAAT CAGCCGGCTG GTCAGATGCC GATATTAACC AGTTCAATAA CTACCTGAAC CTGGTAAAGA ACAATTACAT CAACAACACG CCAGCGTACA ACAACAACTG GAATGCCTCC GCAGGTTATG CAAAGATGGC GATCGGCATT TTCCTGAACA GCGCGACAGT TTACCAGAAT GGCTATAACA TCATCGCACA GCACCTGCCG ATTATTATCA AAGCAGATGG TACCATTCCG GAGTACTGTG ACAGAAATGA CTGCGTGCAT TTCCAGTATT CACTGACTGC ATTCTCCTAC GCAGCGCAAC TGGCAAAGCT ACAAGGGGAT AATTCCCTCT GGACGTTCAA TTCCAACCTG CTCAGCAAAG GATATGACTA CATGAGAGCG GCATATAATC AAACTACTTC TTGTAACAAA TGCTCAACTT CCAGCCCGGT ATTCCCTGGT ACGGAAGTCG CATATGGTTA TTATAAAACA GCTAACCTGC AATACCTCCG GGAATTGCAG GATCCGTTAG GAGTACCTAA CGACAAAACG TTCCTTGGCT TTACCTCCTA CACGCATTTT AACGTACCAG GTATCTGA
|
Protein sequence | MKKTINSLLL CMTMAAMATL LFMCKKQDQN SNAPLLNKSL TAAAGVAPAV FVHPGVLNTQ ASLDLIGSQV NGGEAIRSAA YQKVLDFVNG NALPTKFWET VTVGSNGATT ESKSQIRKDA VLAYALALRW AKTGTATYAQ QCIAILNGWS YTFKQYALMD GANQYQPSLE ASWTTPSFVA AAEIIRYYKA FGQSAGWSDA DINQFNNYLN LVKNNYINNT PAYNNNWNAS AGYAKMAIGI FLNSATVYQN GYNIIAQHLP IIIKADGTIP EYCDRNDCVH FQYSLTAFSY AAQLAKLQGD NSLWTFNSNL LSKGYDYMRA AYNQTTSCNK CSTSSPVFPG TEVAYGYYKT ANLQYLRELQ DPLGVPNDKT FLGFTSYTHF NVPGI
|
| |