Gene Cpin_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2760 
Symbol 
ID8358921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3385178 
End bp3386335 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content48% 
IMG OID644964940 
Producthypothetical protein 
Protein accessionYP_003122440 
Protein GI256421787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.120597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA CCATCAATTC CCTCCTCCTT TGCATGACTA TGGCAGCTAT GGCCACTTTA 
TTATTTATGT GCAAAAAACA GGATCAGAAC AGCAATGCGC CATTGCTCAA CAAAAGTCTG
ACAGCAGCAG CCGGAGTGGC GCCCGCTGTT TTTGTTCATC CGGGCGTGTT GAATACACAG
GCCAGTCTGG ACCTGATCGG CTCGCAGGTC AACGGTGGCG AGGCCATACG TTCCGCCGCC
TACCAGAAAG TACTGGATTT TGTCAATGGT AATGCTTTAC CGACAAAATT CTGGGAAACC
GTTACCGTGG GTTCCAACGG AGCCACTACA GAATCCAAAA GCCAGATCAG AAAAGACGCC
GTACTGGCGT ATGCACTGGC ACTCCGCTGG GCGAAAACCG GTACAGCAAC CTATGCACAA
CAGTGCATTG CCATTCTGAA CGGCTGGTCC TACACGTTTA AACAATATGC GTTAATGGAC
GGGGCTAACC AGTACCAGCC CTCCCTGGAA GCATCCTGGA CGACGCCCAG TTTTGTAGCA
GCAGCAGAGA TCATACGCTA TTACAAAGCA TTCGGACAAT CAGCCGGCTG GTCAGATGCC
GATATTAACC AGTTCAATAA CTACCTGAAC CTGGTAAAGA ACAATTACAT CAACAACACG
CCAGCGTACA ACAACAACTG GAATGCCTCC GCAGGTTATG CAAAGATGGC GATCGGCATT
TTCCTGAACA GCGCGACAGT TTACCAGAAT GGCTATAACA TCATCGCACA GCACCTGCCG
ATTATTATCA AAGCAGATGG TACCATTCCG GAGTACTGTG ACAGAAATGA CTGCGTGCAT
TTCCAGTATT CACTGACTGC ATTCTCCTAC GCAGCGCAAC TGGCAAAGCT ACAAGGGGAT
AATTCCCTCT GGACGTTCAA TTCCAACCTG CTCAGCAAAG GATATGACTA CATGAGAGCG
GCATATAATC AAACTACTTC TTGTAACAAA TGCTCAACTT CCAGCCCGGT ATTCCCTGGT
ACGGAAGTCG CATATGGTTA TTATAAAACA GCTAACCTGC AATACCTCCG GGAATTGCAG
GATCCGTTAG GAGTACCTAA CGACAAAACG TTCCTTGGCT TTACCTCCTA CACGCATTTT
AACGTACCAG GTATCTGA
 
Protein sequence
MKKTINSLLL CMTMAAMATL LFMCKKQDQN SNAPLLNKSL TAAAGVAPAV FVHPGVLNTQ 
ASLDLIGSQV NGGEAIRSAA YQKVLDFVNG NALPTKFWET VTVGSNGATT ESKSQIRKDA
VLAYALALRW AKTGTATYAQ QCIAILNGWS YTFKQYALMD GANQYQPSLE ASWTTPSFVA
AAEIIRYYKA FGQSAGWSDA DINQFNNYLN LVKNNYINNT PAYNNNWNAS AGYAKMAIGI
FLNSATVYQN GYNIIAQHLP IIIKADGTIP EYCDRNDCVH FQYSLTAFSY AAQLAKLQGD
NSLWTFNSNL LSKGYDYMRA AYNQTTSCNK CSTSSPVFPG TEVAYGYYKT ANLQYLRELQ
DPLGVPNDKT FLGFTSYTHF NVPGI