Gene Cpin_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2531 
Symbol 
ID8358690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3105682 
End bp3106053 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content37% 
IMG OID644964714 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003122216 
Protein GI256421563 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAGA AGAAAACACC CATTCAAATA AATTGTGGTC TACATTTCTT TAAAGAATTA 
TTGAATGGGA AATGGAAGTT GATGCTTATT TATTATGTGT CCCAGGGGTT TCACCGCCCC
AGTGAATTAC AACAAAAGAT ACAGAATGGT GATCGCAGAG TACTGGATAA GCAGTTAGGG
GAACTGGTGA ATCATGGTTT TTTGGAAAAA CAGGTATACA ATACAAAGAT GCCTAAAGTG
GAATACAAGT TGACGCCATT AGGTAATGAC TTAGTTCCGC TTATTATAGT GATGGAAAAA
TGGGGAGAGG AACACAGGGA GGATCTTGAA AAAGGATTGA AGAATGATCC TAAGTTTACG
GACGTTTTGT AA
 
Protein sequence
MYKKKTPIQI NCGLHFFKEL LNGKWKLMLI YYVSQGFHRP SELQQKIQNG DRRVLDKQLG 
ELVNHGFLEK QVYNTKMPKV EYKLTPLGND LVPLIIVMEK WGEEHREDLE KGLKNDPKFT
DVL