Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2292 |
Symbol | |
ID | 8358447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2825150 |
End bp | 2826115 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644964478 |
Product | beta-lactamase domain protein |
Protein accession | YP_003121984 |
Protein GI | 256421331 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0204091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.304902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC AACAAGCACT GGTTAAAATT AAAGCATGCG CAGAACATGA GTGGTTTTCT GTAGCACCTG GTGTATGGGG TGTACGTGAC AGGATTGTCA ATGTCTATTT TGTACATGAC CCCTCCACGA ATCACTGGAT ATTGGTAGAT ACAGGCTTGC GTGGCGCCGC TGCCAGAATC AAAAGAGTGG CCAGGGAATT ATTCTGGCCG CAGGCAACAC CTGCTGCCAT TATCCTGACA CATGGTCATT TCGACCATGT CGGCACTGTG AAACAGCTGG CAGATGAATG GGATGTACCG GTATATGCAC ACTATCTGGA AGCACCGTAT CTGACAGGGC GTTCTGCTTA TCCACCCCCT GATCCGTCAG CAGGTGGCGG GCTGTTTACC TGGCTCTCCT TTTTGTTTCC CAAAAACCCC ATTGATCTTG GTGGACGATT ACTGCTGTTA CCTGAACAGG GAAATATTCC CGGACTAAAA GAATGGAAAT ATATCCATAC CCCTGGTCAC GCACCTGGCC ATATCAGCCT CTATAGAGAA CATGACGGTG TACTGCTGGC CGGAGATGCC TTTGTCACTA CTCAGCAGGA ATCATTACTG TCTGTTCTGA AACAGGAAAG AAAGCTGTCT GGTCCGCCCC GTTACTTCAC ATATGACTGG TTAGCTGCGG AAAAATCAGT ACGTCATCTT GCATCATTAC AACCCAGTAT TGTGGCTACC GGTCACGGAC ATCCGATGGA GGGAGAGGCG CTTGCTGCAT TACAGGAACT CGCAGATAAC TTTCAGGAAC AGGCTGTGCC GGCACATGGA CGTTATACCG GAGATCCTGC CGTTGCAGGT ATCAGTGGTG TAGAATACGT TCCGGCGCCT AATAATCGTA AAACCTTACT CCGGGCTGCT GCCGTGCTGG CACTGGTAGG TATAGGCGCA TTATTGGCCA GTGAAGCAAA AAAGAGGTAT AGCTAG
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Protein sequence | MKKQQALVKI KACAEHEWFS VAPGVWGVRD RIVNVYFVHD PSTNHWILVD TGLRGAAARI KRVARELFWP QATPAAIILT HGHFDHVGTV KQLADEWDVP VYAHYLEAPY LTGRSAYPPP DPSAGGGLFT WLSFLFPKNP IDLGGRLLLL PEQGNIPGLK EWKYIHTPGH APGHISLYRE HDGVLLAGDA FVTTQQESLL SVLKQERKLS GPPRYFTYDW LAAEKSVRHL ASLQPSIVAT GHGHPMEGEA LAALQELADN FQEQAVPAHG RYTGDPAVAG ISGVEYVPAP NNRKTLLRAA AVLALVGIGA LLASEAKKRY S
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