Gene Cpin_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2047 
Symbol 
ID8358198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2495355 
End bp2495657 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content40% 
IMG OID644964234 
Productribosomal protein L21 
Protein accessionYP_003121743 
Protein GI256421090 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAG TTGTAAAAAT CGCAGGTCAG CAATTCAAAG TACAAAAAGA CCAGGAAATC 
TTTGTACAGC AGTTGCAGGG AAATATTGGA GATAAAGTGC AGTTCTCTGA AGTGTTGTTA
GTAGATAATG GTGGTAAGCC GACCGTAGGT ACTGATGTAA AATCAGTGGT AAAAGCAGAG
ATCCTGAGCC ATGTTCAGGG TGATAAGGTA ATTGCTTTCA AAATGAAACG CAGAAAAGGT
TTCAGAAAGA AAGTTGGTCA CCGTACACAC TTTACAAAGA TCCGGATCAA CGAGATTGCT
TAA
 
Protein sequence
MFAVVKIAGQ QFKVQKDQEI FVQQLQGNIG DKVQFSEVLL VDNGGKPTVG TDVKSVVKAE 
ILSHVQGDKV IAFKMKRRKG FRKKVGHRTH FTKIRINEIA