Gene Cpin_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1960 
Symbol 
ID8358111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2391415 
End bp2391777 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content44% 
IMG OID644964148 
Producthypothetical protein 
Protein accessionYP_003121657 
Protein GI256421004 
COG category[S] Function unknown 
COG ID[COG5646] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CCGCCCCGGA TATCAACACT TATATCGCCG ATTTCCCCGA AAATGTACAG 
GCAATCCTTC AGCAGGTGCG CGCTACTATT CACAAAGCAG CTCCTGAAGC AACAGAAGAC
ATTAAATATG CCATACCAAC ATTCGTATTA AACGGCAACC TGGTGCATTT TGCCGCATTT
AAAAGCCATA TCGGCTTCTA CCCCACCCCA ACGGGTATCG AAGAATTTGA GAAAGAGTTA
TCTGCATATA AACAAGGAAA GGGGTCTGTA CAGTTTCCAT TAGACCAGCC AATGCCGCTG
GATCTGATCA CACGGATCGT AAAATACCGG GTTAAACAAA ACGCTGAAAA GAAGAAGAAG
TAA
 
Protein sequence
MKNTAPDINT YIADFPENVQ AILQQVRATI HKAAPEATED IKYAIPTFVL NGNLVHFAAF 
KSHIGFYPTP TGIEEFEKEL SAYKQGKGSV QFPLDQPMPL DLITRIVKYR VKQNAEKKKK