Gene Cpin_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1933 
Symbol 
ID8358084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2359672 
End bp2360391 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID644964121 
Producthypothetical protein 
Protein accessionYP_003121630 
Protein GI256420977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.637416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC TCATTACCGG AATATTATTC CTGTTCTGCT GCTGCAGCCT GCTGGCTGTA 
AAGGTACAGG CGCAGGTAAC AGTGACGGGA ACTATTATGG ACAAGGAAAA CAAGCTTGTC
CTTCCGTATG CAAGCGTAAC CAACAAGAGC ACGGGCCGGC GTTCCTATTC AGACAAGGGA
GGTTTTTATA AGATCTCTGC CAGTCCGAAG GACGTCATTG TATTCTCCTT TCTGGGGTAT
AAGTCCGATA GCCTCGTTGT TATACAAGCC AGCGGTACGG AAACCCGGAA TGTTTCTCTC
GTGGTCGAAG CCCGTCAATT GCATGGGGTA AACGTCGGTG CACAGTATAG TCCATATCAG
GCGGACTCCA TTTCCCGAAG GGAGCAGTTT GGTTATATCC TGGATAAGAA GGATATGCCA
CTGGCTGGTG GGAATACGCC GGTAGGAGCG GGGATTGTCT TTAGTCCTTT TACCCGGTAT
TCCAGAAAAG AGAAACAAAA ACGTGAGTTT AAGAAGATTT TTGCGAAGGC GGAGCAGGAG
CGCTACATAG ATTCCAGGTA TACGGCGGCC TTTGTGAGCA AAGTGACCAG CCTGAAGGGC
GATTCTTTAC AGTTGTTTAT GCGGGACAAC CATCCTGACC ATAATATGCT GAGAACGATG
CCGCAGGAAG ACCTGATCTA TTGGATTACG GATAAATACA AGGCATGGAA AAAGAATTAG
 
Protein sequence
MKRLITGILF LFCCCSLLAV KVQAQVTVTG TIMDKENKLV LPYASVTNKS TGRRSYSDKG 
GFYKISASPK DVIVFSFLGY KSDSLVVIQA SGTETRNVSL VVEARQLHGV NVGAQYSPYQ
ADSISRREQF GYILDKKDMP LAGGNTPVGA GIVFSPFTRY SRKEKQKREF KKIFAKAEQE
RYIDSRYTAA FVSKVTSLKG DSLQLFMRDN HPDHNMLRTM PQEDLIYWIT DKYKAWKKN