| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1874 |
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| Symbol | |
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| ID | 8358025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2280243 |
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| End bp | 2281748 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964062 |
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| Product | All-trans-retinol 13,14-reductase |
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| Protein accession | YP_003121571 |
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| Protein GI | 256420918 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTATG ATGTAGTTAT AATAGGAAGC GGGCTGGGAG GCCTTGTTTG CGGAGCCATT
CTCAGCAAGA ATGGTTACCG TGTCTGTATT TATGAAAAGA ACAGGCAAAT AGGCGGTTGT
TTGCAAACCT TTTCACGTGA CAAAGCGATT ATCGATTCAG GTGTACATTA TGTAGGTGGT
TTAGAGGATG GACAGACCCT GAACCAGGTA TTCCGCTATC TGGGTATCCT GGATTCGATG
AAACTGAAAC GGATGGAAAT GGATGGTTTC GATCATATTC ATTTCGGGGA AGAGCAGAAA
GTGTATAAAC TGGCACAGGG CTATGATAAT TTCATGCGGC AGTTATTAGC AGACTTTCCT
GGTGAAAAAG AAGCATTACA TGCATACTGT GAGAAGATGA AGGAGGTATG CGGTAAGTTC
CCGCTATTTA ACCTGCGGAT GGGAGATTAC CGGGAGAAGG AGAGTGTCAT GAAACTGGAT
ACCTATGACT TCCTTTCCAG CATTACCGAT AATGAGCGGC TGCGACAGGT ACTGGCAGGC
AATAACCTGT TATATGCCGG AGAACAGGGG AAAACACCGC TTTATGTACA TGCCCTGGTA
CAGCATAGTT ATATTGAAAG CTCCTGGAAG TGTGTAGACG GCGGTTCACA GATCTCCCGG
GCATTGAATA AAATTATCAA AGACAATGGA GGCACGATCA TCCGCAATAC AGCTGTGAAA
CGTATTGTGG AGTTTGACGG TAAGGTAGAT CATATTGTAC TGGAGAACGG TGAAGAAGTA
AGCGCACGCC ATTACATTTC GGGTTTACAT CCGTCTATAA CCATGCAGAT GACAGAAAGC
GTAAGCTTGC GCAATGCATA CCGCAGCAGA TTGCAGAGCC TGGAAAATAC ACCCGGTACG
TTCATGCTGA ATGTCGTACT GAAGCCGGGT ACATTCCGAT ATCAAAATTT CAATTACTAC
CATCACGCGT CTGATAATGC CTGGGATGGG GTACATTATA CGGCTGACAA CTGGCCTAAT
ACCTACGCCT TATTCGTCGC GGCAGGTACC GGCAAAGAAG AATATGCCGA TAATCTGTCT
ATCATGACCT ACATGCGATA TGCCGATGTA GCGGAATGGC ATGACACTTT TAATACGGAT
TCCTGTCCGG ATGAAAGAGA TGCCGCTTAT CAGGCATTTA AGAAGGAAAA GTCAGAGAAA
CTGCTGGACC TGGTAGAAAA GCAATATCCG GGTCTGCGGG ACTGCATACA TGCCTATTAT
GCTTCTACAC CGCTGACCTA CAGGGACTAC CTGGCAATGC CGGAAGGGAG TATGTACGGG
GTGGCTAAAG ATGCCAATGA CCCCTTAAAA ACAGTCATTT CCGCTGCCAC TCGTCTACCC
AATTTGTATC TTACCGGGCA AAACCTGAAC TTGCATGGAA TTTTGGGCGT AACGATGACG
GCAGTGGTGA CAAGTTCGGT ACTGCTGGGC ATGGAAAAGC TGATAAAAGA TATTAACGCA
GCATAA
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| Protein sequence | MQYDVVIIGS GLGGLVCGAI LSKNGYRVCI YEKNRQIGGC LQTFSRDKAI IDSGVHYVGG
LEDGQTLNQV FRYLGILDSM KLKRMEMDGF DHIHFGEEQK VYKLAQGYDN FMRQLLADFP
GEKEALHAYC EKMKEVCGKF PLFNLRMGDY REKESVMKLD TYDFLSSITD NERLRQVLAG
NNLLYAGEQG KTPLYVHALV QHSYIESSWK CVDGGSQISR ALNKIIKDNG GTIIRNTAVK
RIVEFDGKVD HIVLENGEEV SARHYISGLH PSITMQMTES VSLRNAYRSR LQSLENTPGT
FMLNVVLKPG TFRYQNFNYY HHASDNAWDG VHYTADNWPN TYALFVAAGT GKEEYADNLS
IMTYMRYADV AEWHDTFNTD SCPDERDAAY QAFKKEKSEK LLDLVEKQYP GLRDCIHAYY
ASTPLTYRDY LAMPEGSMYG VAKDANDPLK TVISAATRLP NLYLTGQNLN LHGILGVTMT
AVVTSSVLLG MEKLIKDINA A
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