Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1652 |
Symbol | |
ID | 8357794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1991774 |
End bp | 1993135 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963832 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_003121349 |
Protein GI | 256420696 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAT CCAACCGGCT TACCTTATTT ATATTCATAG CCATGGTATT GGGTATCCTC ACAGGATACA TAGTGAACGT GAACTACACC GAAATGTACG GTGGTGGCGC TCAGCAGACG ATAACTGACA ACGGCATCCA TGGTGGACTG ACCGGGTACA TCACAGGATT GAATACAGGC AGGGGCAAGA CCGGAGAGAC CACTATTCTG AAATTCGCAG ATAATATTTC GATTCTTACT GATATATTTT TACGACTGGT AAAAATGATC ATTGCTCCGC TAGTATTTTC CACGCTGGTA GTGGGTGTGG CTAAATTGGG GGACATTAAG GCAGTAGGAC GTATAGGCGG TAAAACGATG TTATGGTTTA TTTCGGCTAC TTTCGTTTCT CTTTTCCTTG GACTGATCCT GGTAAATATT ATGCAACCTG GCCACTCCCT GAACCTGCCT TTACCTGATA CACATGCCAG CAGCGGGGTG GCTGCCTCCA GCATGACGCT CAAAGGTTTT TTCCAGCACG TATTTCCGGA TAGCGTGATT AACGCGATGG CACACAACGA AATTCTGCAG ATCGTCGTAT TTGCATTATT CTTTGGCGTG GCTACTGCTG CTATCGGTAC TACCGGCGAT ATCGTTGTGA AATTCATGGA CAGCGTGGCG CATATCATGT TGAAAGTAAC CGGATATGTA ATGAACTTCG CCCCATTCGC CGTATTTGGC GCCATGGCGG CAATCATTTC ACAAAAGGGG CTGGGCATTC TGCTGACCTA CGGGAAATTC ATCGGACAGT TCTATGTAGG TCTTGCTGCA TTATGGATCG TATTAGCTTT TGCAGGATTT GTCGTACTGG GATCCAGGGT ATTTACCTTG CTTGGTCTGG TAAAAGATCC GTTATTGCTG GCCTTCAGCA CAGCAAGCAG CGAAGCGGCG TATCCGCGTA CCATGGAAGA ACTGGAGAAG TTCGGTTGCG ATAAACGTAT TGTCAGTTTC GTACTGCCAT TAGGTTATTC CTTTAACCTG GACGGCTCCA TGATGTATAT GACTTTCGCC AGTCTCTTTA TAGCACAGGC ATATAGTATG CACCTGGGTA TCGAACAACA GATTTCCATG TTGCTGGTAC TGATGATCAC CAGTAAAGGG ATTGCAGGTG TACCAAGGGC TTCCCTGGTG GTAATTGCCG GTACATTATC TATGTTTAAT ATTCCGGAAG CCGGCTTATT GTTGCTGCTC GGCGTAGATC ACCTGTTGGA TATGGGACGT TCTGCAACCA ACGTGATTGG TAACGCAATG GCTACTGCTG TTGTTTCCAA ATGGGAAAAC TCACTGGGAA CCGAACCGGC AGGCGAGTTA AAGGAAGTAT AA
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Protein sequence | MKRSNRLTLF IFIAMVLGIL TGYIVNVNYT EMYGGGAQQT ITDNGIHGGL TGYITGLNTG RGKTGETTIL KFADNISILT DIFLRLVKMI IAPLVFSTLV VGVAKLGDIK AVGRIGGKTM LWFISATFVS LFLGLILVNI MQPGHSLNLP LPDTHASSGV AASSMTLKGF FQHVFPDSVI NAMAHNEILQ IVVFALFFGV ATAAIGTTGD IVVKFMDSVA HIMLKVTGYV MNFAPFAVFG AMAAIISQKG LGILLTYGKF IGQFYVGLAA LWIVLAFAGF VVLGSRVFTL LGLVKDPLLL AFSTASSEAA YPRTMEELEK FGCDKRIVSF VLPLGYSFNL DGSMMYMTFA SLFIAQAYSM HLGIEQQISM LLVLMITSKG IAGVPRASLV VIAGTLSMFN IPEAGLLLLL GVDHLLDMGR SATNVIGNAM ATAVVSKWEN SLGTEPAGEL KEV
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