Gene Cpin_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1499 
Symbol 
ID8357640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1842143 
End bp1843117 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID644963679 
Producthypothetical protein 
Protein accessionYP_003121197 
Protein GI256420544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCA GCCGGATTAT AAATAACGAC GATGAATACA TCGACGGTTT GCTAGACAGC 
TCCCCTGCAA TTGTTGACGC GATCTATAAG CGTTTTGCCC GCAAGGTAAA ACATATGGTG
ACAGGTTGGG GTGGCAACAT CAAAGAAGCA GCCAATGTAT TCGAAGATGT ATTAATCGCC
CTTTACGATT ATGCTCATCT TCATAAATTA ACCCTTACAA ATCGTTTTGA GCCTTTTTTC
ATGTACGCCT GTCAGCTGAA ATGGAAACAG GACCTCATGC AGAAAGCGCC TACAAAAGGA
ATGTCATTTC ATCCCGAAGT GCCCGCTCCC GGCCTGGATG AACAGCATAT CAAATACATA
GAGGCAGCAT TAGCTGCTCC ACATACCAAG CAGGGTGCGG ACAACACCCG GGAAGAATTG
GAAGAAATGA TCGCCGATCA GCGGGAACGC TGGTTTCATA CCAAAGAAGG CCCTAACAGC
AAAGTGAGTA TCTACGTGAT CATCACTGCT ATAATAGGTG CAGGTCTGGC AGGACTTCTA
TTCCTCAGCC CATGGCATAA AGATATCTAC CGTCAGTTTT CAGGAACGGA AATGGTACAT
GCCAATCATA TGTCTACGGA ACAGGATACC GCACTACTGA TGCATCAGGC AGCAGCAGCC
TTCAATCATG GTCATTTCAA TAAAGCGATC GGTCTTTTGA ATCAGGTAAT AGTTAGGGAC
TCCTTACATA CAACTGCCCG TTACTACAGG GGAGTCAGCC TTGTAGACGA GGGAAAACTG
GGAGAAGCCC GCGCTGATCT TAAAAAAGTA TACAACAGCA ACTCCAGCTA TAGATATGAC
GCCGCCTTCT ACATGGCATT AAGTTATATC CGTGAAAATG ATAAACAGCA ATGCCTGGAA
TGGGTGCTCA AGATACCGGA AAACTCCACG GTACATTGGA AAGCAGCCAG ACTGAAGGAG
GAATTGAACT ATTAG
 
Protein sequence
MVSSRIINND DEYIDGLLDS SPAIVDAIYK RFARKVKHMV TGWGGNIKEA ANVFEDVLIA 
LYDYAHLHKL TLTNRFEPFF MYACQLKWKQ DLMQKAPTKG MSFHPEVPAP GLDEQHIKYI
EAALAAPHTK QGADNTREEL EEMIADQRER WFHTKEGPNS KVSIYVIITA IIGAGLAGLL
FLSPWHKDIY RQFSGTEMVH ANHMSTEQDT ALLMHQAAAA FNHGHFNKAI GLLNQVIVRD
SLHTTARYYR GVSLVDEGKL GEARADLKKV YNSNSSYRYD AAFYMALSYI RENDKQQCLE
WVLKIPENST VHWKAARLKE ELNY