Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1407 |
Symbol | |
ID | 8357527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1677336 |
End bp | 1678706 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644963566 |
Product | peptidase M20 |
Protein accession | YP_003121105 |
Protein GI | 256420452 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTT GGAAAGATTA TCAGGTACAG AATAAAGATC GTTTCCTGGA AGAACTGCTG GAACTGCTGC GCATTCCCTC TGTTAGTGCG GATTCCCGCT TTAACCCGGA TGTAAAAAAC TGCGCTGAAG CTGTAAAACT GCGTTTGCAG GAAGCAGGTG CTGAAAAAGT GGAAGTGTGC CCTACCGCTG GCCATCCTAT CGTATACGGT GAAAAAATCA TCGATCCGAA ACTGCCTACG GTACTGGTAT ATGGTCACTA TGACGTACAA CCGGCCGATC CGCTGGAACT GTGGGACAGT GGTCCGTTTG AGCCTGTGAT CAAAGACGAA AAGATCTATG CACGTGGCAG CGCTGACGAT AAAGGTCAGT TCTACATGCA TGTCAAAGCG TTCGAAACCA TGTCCAAAAC CAACACTCTG CCCTGCAACA TCAAATTTAT GATTGAAGGG GAAGAGGAAG TAGGTTCTGC CAACCTGGGT ATTTTCATCA AAGAGAATAA AGAAAGACTG AAAGCGGACG TAGTACTGAT CTCCGATACT GCTATGATCA GCCTCGAAAA CCCATCCCTG GATACTGGCT TACGCGGTCT GTCCTATATG GAAGTAGCCG TGACCGGTCC AAACCGTGAC CTGCACAGCG GCGTGTATGG GGGTGCTGTA GCTAACCCGG CTACCATCCT GTGCAAAATG ATCGCTTCCA TGCACGACGA AAACAACCAC ATCACCATTC CCGGCTTCTA TGATAAAGTA CAGGATCTCA GCCAGGCAGA ACGCGACGCA CTGAATGCAG CTCCCTTCGA TGAAGCGGAA TATAAAGCCG ACCTGGGGGT AGACGAACTC TGGGGGGAAA AAGGTTATTC TACCATCGAG CGTACCGGTA TCCGTCCTAC CCTGGAGGTA AACGGTATCT GGGGTGGATA TACCGGCGAA GGTTCTAAAA CCGTGCTGCC ATCCAAAGCA TTCGCTAAGA TCTCTATGCG CCTCGTGCCT AACCAGGACT GGGTCGAGAT CTCCCAGTTG TTCCAGGCAC ACTTCGAAAA GATCGCGCCT AAGAGCGTAA AAGTAAAGGT AACAACCCAC CACGGTGGCA GCCCTTACGT AACGCCGACA GATCATATCG CTTTCAAAGC CGCCAACGAA GCCATCCAGG CTACCTTTGG TAAAGCGCCT ATCCCGATGC GTGGCGGTGG AAGTATTCCG ATCGTAGCGC TGTTCGAAAA AGAACTGGGC CTCAAAACTA TCCTCATGGG CTTCGGTCTG GATAGTGATA ACCTGCACTC GCCAAATGAA AAATACGGTC TGGCTAATTT CTATAAGGGT ATCGAAACCA TCCCTTATTT CCACAAATAC TTTGCGGAAC TGAGCAAATA G
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Protein sequence | MQVWKDYQVQ NKDRFLEELL ELLRIPSVSA DSRFNPDVKN CAEAVKLRLQ EAGAEKVEVC PTAGHPIVYG EKIIDPKLPT VLVYGHYDVQ PADPLELWDS GPFEPVIKDE KIYARGSADD KGQFYMHVKA FETMSKTNTL PCNIKFMIEG EEEVGSANLG IFIKENKERL KADVVLISDT AMISLENPSL DTGLRGLSYM EVAVTGPNRD LHSGVYGGAV ANPATILCKM IASMHDENNH ITIPGFYDKV QDLSQAERDA LNAAPFDEAE YKADLGVDEL WGEKGYSTIE RTGIRPTLEV NGIWGGYTGE GSKTVLPSKA FAKISMRLVP NQDWVEISQL FQAHFEKIAP KSVKVKVTTH HGGSPYVTPT DHIAFKAANE AIQATFGKAP IPMRGGGSIP IVALFEKELG LKTILMGFGL DSDNLHSPNE KYGLANFYKG IETIPYFHKY FAELSK
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