| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1336 |
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| Symbol | |
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| ID | 8357454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1593718 |
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| End bp | 1596252 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963494 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_003121035 |
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| Protein GI | 256420382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAA GGAGAGACTT TATCAAAAAA GCCGCATTGC TATCAGGCGG CGCAGGTCTG
GCAGGTGTAT TGCCAGCCTC TATTCAGAGA GCTATGGCCA TCAATCCGGC TGCCGGTACA
ACCTTCCTTG ATGCGGAACA TGTCGTACTG CTGATGCAGG AAAATCGCTC GTTCGATCAT
AGTCTTGGTA CACTGCGCGG TGTACGCGGA TTCAATGATC CCCGTGCTAT CAGACAGCCT
GATAAAAATC TGGTGTGGCT GCAGTCCAAT GCGAAAGGAG AAACGTATGC TCCTTTCCGC
CTTGATATCA AAGATTCAAA GGTCACCTGG ATGAGTTCTT TGCCACACTC ATGGGAAAAC
CAGGTGGATG CCCGCAATAA TGGTAAATAC GATAAATGGC TGGATGTAAA ACAGTCCGGT
AATAAAGAAT ACGCCAACCT GCCACTCACC ATGGGTTATT TCACCCGTGA GGACATTCCT
TTCTATTACG CACTGGCTGA CGCATTCACG GTATGCGACC AGAACTTCTG TTCTTCACTC
ACTGGTACAA CGCCTAACAG ACTCTATTTC TGGACAGGCA CCATCCGTGA AAAACAAAGC
CCTGATGCTG CTCCTAACGT ACGTAACTCA GAAGTGGATT ATGGCGTTCC TGCCAGCTGG
ACCACCTTCC CTGAGCGACT GGAAGAAAAT GGTATCAGCT GGAAAGTATA CCAGAATGAA
CTGAGCGTGG GTGTTGGTTT TACAGGGGAA GAAGATTCCT GGCTGGCTAA CTTCACCGAC
AACCCACTGG AGTTCTTTGC GCAATACAGA CCGGAATTTT CGCTTACGCA CTATAAACAC
GTACAACGTA GCATAGAAAA ACAGAAAGCG GCTATTACCG CCCTGGAAGA CAAATTAAAG
ACACTTTCCG GTGCACAGGC TGACGCCGCT CAGAAAGAGC TGCAGGAGAA AAAGGAGTTG
TTGCTCAAAT TGCAGGAACG GGAAGAAAAA TGGCGTCCTG AGAAATTTGA ACTGCTGTCG
GAACGTGAAA AGAACATCCA CAGAAAAGCA TTCACCACAA ACGAAAAAGA TCCGGATTAC
CATCAGCTGA GCACCCTACA GTATCACGAC GGTACTACGG AGCGTACCAT GCAGGTGCCA
AAAGGCGATG TATTGTACCA GTTCCGCGAA GATGTAAAAA ATGGTCAGTT GCCGACTGTT
TCCTGGATCG TCTCTCCTGA AAACTTCTCC GATCATCCTG GCGCACCCTG GTATGGGGCC
TGGTATGTAG CAGAAGTAAT GGATATCCTG ACACAAAACC CGGAAGTCTG GAAGAAGACC
ATCTTTATCC TGGCATATGA TGAAAATGAT GGCGATTTTG ACCACGTACC ACCATTCGTA
CCTCCACATG GTCCGGGTAC CGGGCTTGTG TCCGAAGGCA TCGATACCAG CGTGGAATAT
GTCACCCGCG AACAGGAGCT CCGTAAAAAT GGTATGCAGG AAGAAGATGT AAGAGAAAGT
CCTATCGGGC TGGGCTACCG TGTACCACTG ATTGTCGCTT CTCCATGGAG CCGCGGTGGT
ATGGTCTGCT CTGAAGTGTT TGACCATACG TCTACCTTAC AGTTCCTGGA GCGCTTCCTG
CATCATAAGA CAGGCAAAAA TATCGTTGAA AGTAATATCA CTGAATGGCG CCGTACCATC
TGCGGAGACC TCAGTTCTGT CTTTACACCA TATAACGGGG AGAAAATACC GTTCCCTTCT
TTTGGTGACA AAGACACATT TATCGAAAGT ATTCATAAAG CGCAGTTCAA AGAGGCGCCT
TCCGGTTTCA AAAAACTGAC GGCTGCGGAG ATTGCTGCGA TCAATCAAAA CCCGGCAACC
GCCCCTTACA TGGCTAAACA GGAAGAAGGT CTCCGACCTG CCTGTGCATT GCCTTACGAA
ATGTATGTGG ATGGTCAGCT GAGTAAAGGC GGTTTTGAAA TATCTTTCAA AGCAGGCAAC
GAACTGGCAG GAAAAGCAGC CGCAGGTGTG CCTTTTAATG TATATGCACC GGGTAAATAT
CTGGCAGCTG ATAATGCCAC TTTTGAAACA GTCAGAACAT GGGCCTATGC AGTAAAAGCA
GGCGACAGAC TGGCGGATCA CTGGCCATTG CAATCATTTG AAAACGGTAT ATACCACCTG
TGTGTCTACG GACCAAATGG GTTTTTCCGC GAATTTGCCG GCAATGATAA AGCGCCACGA
CTTGAAGTAT GGTGCGACTA CGAACGGAAA GGAAAGACCT TTACCGGCAA CGTCTCCCTG
CAGTTAAATA ATCACCATAC CCAGGCGCTG ACGATTGAAA TTATCGATCA TGCGTATGGC
AAATCCGTAC AGAAAAAGAC ACTGGCTGCC AATAGTAAAA CAGCCCTTGT ACTGGATCTG
CAAAAGAGCC ATTCCTGGTA CGATTTCAGC GTACGTATTA CCGGACAAAC ATCCTTTGAA
AGAAGATATG CCGGTCGTGT GGAAAATGGT AAAGCGGGCT TCAGTGATCC TGCGATGGGC
CGAGTGAAAG GATAA
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| Protein sequence | MDTRRDFIKK AALLSGGAGL AGVLPASIQR AMAINPAAGT TFLDAEHVVL LMQENRSFDH
SLGTLRGVRG FNDPRAIRQP DKNLVWLQSN AKGETYAPFR LDIKDSKVTW MSSLPHSWEN
QVDARNNGKY DKWLDVKQSG NKEYANLPLT MGYFTREDIP FYYALADAFT VCDQNFCSSL
TGTTPNRLYF WTGTIREKQS PDAAPNVRNS EVDYGVPASW TTFPERLEEN GISWKVYQNE
LSVGVGFTGE EDSWLANFTD NPLEFFAQYR PEFSLTHYKH VQRSIEKQKA AITALEDKLK
TLSGAQADAA QKELQEKKEL LLKLQEREEK WRPEKFELLS EREKNIHRKA FTTNEKDPDY
HQLSTLQYHD GTTERTMQVP KGDVLYQFRE DVKNGQLPTV SWIVSPENFS DHPGAPWYGA
WYVAEVMDIL TQNPEVWKKT IFILAYDEND GDFDHVPPFV PPHGPGTGLV SEGIDTSVEY
VTREQELRKN GMQEEDVRES PIGLGYRVPL IVASPWSRGG MVCSEVFDHT STLQFLERFL
HHKTGKNIVE SNITEWRRTI CGDLSSVFTP YNGEKIPFPS FGDKDTFIES IHKAQFKEAP
SGFKKLTAAE IAAINQNPAT APYMAKQEEG LRPACALPYE MYVDGQLSKG GFEISFKAGN
ELAGKAAAGV PFNVYAPGKY LAADNATFET VRTWAYAVKA GDRLADHWPL QSFENGIYHL
CVYGPNGFFR EFAGNDKAPR LEVWCDYERK GKTFTGNVSL QLNNHHTQAL TIEIIDHAYG
KSVQKKTLAA NSKTALVLDL QKSHSWYDFS VRITGQTSFE RRYAGRVENG KAGFSDPAMG
RVKG
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