| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0955 |
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| Symbol | |
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| ID | 8357069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1139652 |
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| End bp | 1142051 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963109 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003120654 |
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| Protein GI | 256420001 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCA CTTACATCAC CATTGCATTA AGACATCTTG CGAAACGCAA ACTGTTTTCG
TTTATCAACA TTGCAGGACT TGCCATTGGC ATTACCTTCT CTCTTCTCAT TACTGTTTAT
ATCTGGGAGG AGAAACAAGT CAACCGTGAC CTGAATAATC TTCCACAGCA GTATTTCATG
CAATCTGCCT GGAAGGCTGA TAACATGTAC ATGCCGCTGA TCACTCCCGC GATGCTGGCA
AAGGGGCTGC ATGATCAATA CCCTTCGCTG GTGGCTGATT ATTATCGTAC GTATCCCTGT
TCTGCCAATG CTACTTACAA AGACAGGCAT TTCAGGGTAG GGCTTCAGCC GGGGGATACG
ACTATCGTAT CGAATTTCGG CCTGACGATG TTGTATGGTG ATCCGGCCCA TGCTTTCCGT
GATAATAATT CTGTTGTAAT TACGGAAGAA ACAGCGATGA AGTTCTTTGG TAAAGCGAAT
GCACTGGATG AAGTGCTGAC AATAGATACA AGGCAGGACG GTAAGAAAAA TTACACGGTT
ACCGGCGTAT TGAAAAGTGA AGCAAGAGAG AATAGTGTGA CGACCATCAA CGGGTTTAAG
AATGACATCT TTATGCCGAT GCAGAGTGTT GATTACTTTT TAGGTAAAGA TGGCGATAAA
GACTGGAACA ATGTGTGTAT GGCGTCTTAC ATCCAGTTGA AACCAGGTGT AACACCTGCA
CAGCTGGATG GGCCTATCCG TAAACTGGTA GCGATGAATT GCAATCAGCA GCTGAAAGAC
AATATGGGTA TTCAGCTGGT AGGGCTGGAT TCATTCTATC TCGATACCAA CAATGGTCTG
GTAAGAAAAA TGATTTACAT ACTGGCCATT ATTGCGGGTT TCGTCTTGCT GATGGCAGTG
ATCAACTATG TGAATATCAG TGTGGGGAAC TCTACGTATC GCCTGAAAGA GATCGGTCTG
CGTAAAGTGT TTGGCGGCAG ACGTCAGCAG CTGGTTGCAC AATTCCTTGC AGAATCAATC
GTACTAACCG GTATATCGGC CTTTCTGTCC ATTGCTTTCT ATGAGCTGCT TCGTCCTGTA
TTCGGGCAGA TCCTGAACAA AACGTTACCC CATGTATGGT CTTTCTCCGG AATGCTGGTA
TTGTTTTATT TGTTGCTGGT GCTGGCTGTC GGATTGGTAG CGGGTATATA TCCTGCTTTT
GTGCTGACGG CCAACAACCT GCTGAAAGTA CTGAAGGGAA AGATATCCGT AGGAAAGGGG
GAGCTTGTTT TTCGGAAAGC TTCCCTTGTT CTACAGTTTT CCATCGCGAT ACTGGTATTT
GTATGTACAC TTTATATTTC CCGCCAGATC AACTATTTCT TCAACAGGGA TCTGGGATAT
AATAAAGAGC AGTTGCTGGT TATTTCTTCT GTGCCCCGTC AGTGGGATAG CACAGGACTG
AAACGCCTGG AGCTGTTAAG AGATGAAATG ATGCAGAAGG CCGGTGTGGT CAGCGCCACG
ATTTCTTATG AAGTACCTGA TGGTATGAAT GGCGGCAGTT TGCCCATGTT ACCGCAAGGC
GCTGCCAGCG ATGCACCAGT CAATGTAGAA AGACTTGTTA CAGACGGAAA CTATGCTTCT
ACTTTCGGCC TGAAACTGAC TGCCGGCCGC TTCTTCACTG ATCATGACAG TCCGATGGAT
GTGGTGCTCA ACGAAACTGC TGTGAAAGCA TTGCAACTGA AGCAGGGCGT TGGTCAGGAA
ATACGTATCG CTGGTAATGA TACCAGGCTG ACGGTAAGAG GGATCGTAAA AGACTTTCAC
TTTTTTAACA TGGGGCAGAA GATCGCACCA ATGATATTCT TCACCCAGCA GATTAATCCG
GCATACCGTT TCCTGAGCAT CAAACTGAAG ACGGCTGATA TCAGGAAGAG CATTGCCGGT
ATTGAATCTA CCTTCAAATC CCGCTATAGC GATTCTCCAT TTGATTATTT CTTTATGGAT
GAAAAGTTTC AGGCAATGTA CTTCAGTGAA ACCCGCCTGA AAAAGGCAGC TGATGTAGCT
ACCGGATTAA ACTTTGTGAT TATCTTACTG GGAGCTGCGG GGGTGGTGGC CTTCAGTCTG
ACCCGTCGTG CGAAGGAAGT GGGCGTGAGA AAAGTACTGG GTGCGAACAC GCGTAGTATC
ATCTACCTGT TCCTGAAGGA GTATACTGCC GTTATCATCA TTGCTAATAT CATCGCCTGG
CCGCTTGCTT ATTTCCTTGC GAGTAAATGG CTGGATGGAT ACGCGTATCG TACCAGTATG
AGTTTGGCGC CGTTTATAGT GGCAGGTGGT ATTACCTTTA GTTTAACCTA TATACTGATT
GCATTACAAA GTTTCCGCAC GGCAAATGCC AATCCTACCG GATTGCTGAG ACATGAATAA
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| Protein sequence | MISTYITIAL RHLAKRKLFS FINIAGLAIG ITFSLLITVY IWEEKQVNRD LNNLPQQYFM
QSAWKADNMY MPLITPAMLA KGLHDQYPSL VADYYRTYPC SANATYKDRH FRVGLQPGDT
TIVSNFGLTM LYGDPAHAFR DNNSVVITEE TAMKFFGKAN ALDEVLTIDT RQDGKKNYTV
TGVLKSEARE NSVTTINGFK NDIFMPMQSV DYFLGKDGDK DWNNVCMASY IQLKPGVTPA
QLDGPIRKLV AMNCNQQLKD NMGIQLVGLD SFYLDTNNGL VRKMIYILAI IAGFVLLMAV
INYVNISVGN STYRLKEIGL RKVFGGRRQQ LVAQFLAESI VLTGISAFLS IAFYELLRPV
FGQILNKTLP HVWSFSGMLV LFYLLLVLAV GLVAGIYPAF VLTANNLLKV LKGKISVGKG
ELVFRKASLV LQFSIAILVF VCTLYISRQI NYFFNRDLGY NKEQLLVISS VPRQWDSTGL
KRLELLRDEM MQKAGVVSAT ISYEVPDGMN GGSLPMLPQG AASDAPVNVE RLVTDGNYAS
TFGLKLTAGR FFTDHDSPMD VVLNETAVKA LQLKQGVGQE IRIAGNDTRL TVRGIVKDFH
FFNMGQKIAP MIFFTQQINP AYRFLSIKLK TADIRKSIAG IESTFKSRYS DSPFDYFFMD
EKFQAMYFSE TRLKKAADVA TGLNFVIILL GAAGVVAFSL TRRAKEVGVR KVLGANTRSI
IYLFLKEYTA VIIIANIIAW PLAYFLASKW LDGYAYRTSM SLAPFIVAGG ITFSLTYILI
ALQSFRTANA NPTGLLRHE
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