Gene Cpin_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0739 
Symbol 
ID8356851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp895100 
End bp896224 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content44% 
IMG OID644962891 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_003120438 
Protein GI256419785 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000829129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAGGT CAAATAGAAT AATACCCATT CAGCCGATTC AGGATGTATT GGAAACCTTG 
AACCCTTTCA AGGCCAGGAA GCAACGGTTA ATGAACTATA ATCCGGTAAC CGGTCCGCTG
ACCAGGAAAC CATCTGTTTG TGAGAAGATT ACCATCTTTA ATTACAGCAA TACATATTTT
GAAGAGGTGA CCTTAGCCGG AAACCAGGTA GACGAGATTT TTAAACATAT TGACAGTAAG
AACACCGTGT GGATTAATGT CGATGGCATC AATAAAGAAA CCGTACACAG GATCTGTATT
GAACTGGGTA TTCACATCCT GCTGGAAGAT GATATAATGA GCGTAGGACA GCGGGCAAAG
ATGGACGAAA TCGGAGATCA CCTGTTCTGC CTGCTCCCTA TGATGTATTT CAATGCAGAA
AACTGTACGG TGGACCAGGA GCAGGTCAGT ATTGTATTAG GAAAGAATTT CGTTATCTCC
TTCCAGGAAG AAGTGGAAAA GGACGTCTTC AATCACGTAA GAGAAAAGCT CCGCATCAAT
AACTCACGTA TGCGCTCAGT GGGAGCCGAT TATCTCTGTT ATTCACTGAT AGATACAATT
GTGGATAGCT ATTATCTCAT TATAGAGAAA CTGGGAGAAA GGATTGAGTT GATGGAAGAT
GCGGTACAGC ATCAGGCTAA TACCCGTGCG CAGGCCAGAA TTAATTTCCT GCGCAAGGAA
TTATTGCTGT TCAAACGGGC AATTGCCCCG GTAAGGGAAC TGGTAAACGG ATTCCTGAAA
AGTGACAGCG ATCTGCTGGA GGAGCGGACC ACCAAATATT TCAAAGATGT ATACGATCAT
ATCATCCAGG CCAATGACCT GGCGGAGAAC TACCGCGATA TGATATTGAA CGTACAGGAT
CTCTATCACA CCCAGATCAA TCTCAAAATG AATGAGATTA TGAAGGTATT AGCGGTGGTA
ACTACCATTA TGGCCCCGCT GACTTTCATC GCCGGGATCT ATGGTATGAA CTTCGACAAT
ATGCCGGAGC TGCATACCAG GAATGGGTAT TACTACACCA TGGGCTTTAT GCTGGTGATG
TTGATCGGAA TGATCCTGTT ATTTAAGAAG AAACGCTGGT TTTAA
 
Protein sequence
MPRSNRIIPI QPIQDVLETL NPFKARKQRL MNYNPVTGPL TRKPSVCEKI TIFNYSNTYF 
EEVTLAGNQV DEIFKHIDSK NTVWINVDGI NKETVHRICI ELGIHILLED DIMSVGQRAK
MDEIGDHLFC LLPMMYFNAE NCTVDQEQVS IVLGKNFVIS FQEEVEKDVF NHVREKLRIN
NSRMRSVGAD YLCYSLIDTI VDSYYLIIEK LGERIELMED AVQHQANTRA QARINFLRKE
LLLFKRAIAP VRELVNGFLK SDSDLLEERT TKYFKDVYDH IIQANDLAEN YRDMILNVQD
LYHTQINLKM NEIMKVLAVV TTIMAPLTFI AGIYGMNFDN MPELHTRNGY YYTMGFMLVM
LIGMILLFKK KRWF