| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0701 |
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| Symbol | |
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| ID | 8356813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 843599 |
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| End bp | 844723 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962853 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003120400 |
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| Protein GI | 256419747 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA AAGATCTATA CAGGAAAGCA TTAAACTTCG AGTGGCTCAC ACCGGAAGAA
GGGATTTACC TCTTTGAAAA GGCACCGCTT GCGGAACTGA TGGATGTGGC GAATGAACTG
CGTAAGCAGC AGGTACCTCA TGGAAAGGTG ACCTGGCAGA TTGACCGAAA CGTGAATACA
ACGAACGTGT GTACGGCCAA CTGTAAGTTC TGCAACTTCT ACAGGGTTCC CGGTCATGCT
GAGGCTTATA TTACCAGCAT TGACGAATAC AAGAAAAAGA TAGAAGAGAC GCTGAAATTC
GGCGGAGACC AGCTGCTGCT GCAGGGAGGT CACCATCCGG AGCTGGGGCT GAAATTCTAT
GTAGATACTT TCAAACAGCT AAAGCAGTTA TATCCTGCTG TGAAGCTGCA CGCACTCGGT
CCCCCCGAAG TAGCGCATAT CACTAAACTG GAAAAGAGCA CGCATATCGA GGTGCTGGCT
GCATTGCAGG AAGCTGGTAT GGCCAGTTTA CCGGGAGCAG GCGCTGAGAT TCTGAATGAC
CGCGTACGCC GTCTTATTTC CAAAGGAAAA TGCGGTGCAC AGGAATGGCT GGATGTCATG
AGAGCTGCCC ATAAACTGAA TATTCCGTCA TCAGCTACCA TGATGTTTGG TCACGTGGAG
ACACTGATGG AACGTTTCCA GCATTTTGCC GACATCCGTC AGGTACAGAG TGAAAAGCCG
GAAGGCCATT ATGGTTTTAC TGCGTTCATT CCGTGGACAT TCCAGGATGT AGATACGCTG
TTATCACGTA TCCGTGGTGT ACACAACATG ACAAGTTCCG AAGAGTATAT CCGTATGATC
GCTATGAGCC GTATCATGCT GCCGAATATC AAAAACATCC AGGCTTCCTG GCTGACAGTA
GGTAAGCAGG TAGCGCAGAT CTGTCTGCAC GCCGGTGCAA ACGACTTCGG TTCTATCATG
ATCGAGGAGA ATGTGGTGAG CGCTGCTGGT GCTCCGCACA GATTCACCTA CCGCTCTATG
CAGGAAGCGA TCAAAGAAGC TGGTTTCGAA CCGCAACTGC GTACACAGTT GTATGAGTTC
AGAGAGATTC CGGCGGGCAT ACAGGAGCAG GTGATCAATT ACTAA
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| Protein sequence | MELKDLYRKA LNFEWLTPEE GIYLFEKAPL AELMDVANEL RKQQVPHGKV TWQIDRNVNT
TNVCTANCKF CNFYRVPGHA EAYITSIDEY KKKIEETLKF GGDQLLLQGG HHPELGLKFY
VDTFKQLKQL YPAVKLHALG PPEVAHITKL EKSTHIEVLA ALQEAGMASL PGAGAEILND
RVRRLISKGK CGAQEWLDVM RAAHKLNIPS SATMMFGHVE TLMERFQHFA DIRQVQSEKP
EGHYGFTAFI PWTFQDVDTL LSRIRGVHNM TSSEEYIRMI AMSRIMLPNI KNIQASWLTV
GKQVAQICLH AGANDFGSIM IEENVVSAAG APHRFTYRSM QEAIKEAGFE PQLRTQLYEF
REIPAGIQEQ VINY
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