Gene Cpin_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0669 
Symbol 
ID8356781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp809496 
End bp811475 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content49% 
IMG OID644962821 
Producthypothetical protein 
Protein accessionYP_003120368 
Protein GI256419715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCA CTACTGTTAG TATAAAGAAG TTTGTATTAT CCCTGTTCTT TTGTCTGGGC 
GCAATTACGT GCCTGCAGGC GCAGGAATTC AGGTTCACTA CCAGCGTCAG CAGTAATAAG
GTCGCGGTGG ATGAACCGTT TCAGATACAA TTCATGCTGG AAAATGCGCC AAACGTTACC
AGCTTTACAC CTCCGGCTTT CAATGATTTT GAAATCCTGC AAGGGCCATC CCAGATGCAG
GGGCAGTCTA TTATGAACGG ACGCCGTTCC GAATACATTG CGCTGATCTA TGTAGTCCAG
CCCAAAAGGG TAGGTAACTT TACCCTGCCG GGAGCCACAG CCCGTTCCGA CGGGAAAGTC
GTGCGCTCTA ACCCGGTCAC TATTGAGGTG TTAAAATCCA ATTCCGGTCG TGGTCAGGCG
CCCCAGCAGA CGGCTCCGCA ACAGAATTAT CCGCAAACCC GGGCACAGCG TCAGCAGCAA
CAGCAGGACG AAATGGAAGG CGTACTCCGG AATGGAGAAG ACATCAACGC AAAACTGAAA
AAGAATATTT TCGTAAAGGT AGATGTGGAT AAGACCTCCC TGTATGAGGG CGAGCAACTG
ACCGCTACCT ATAAATTATA TACCCGGCTC CCGACCAACT CCAGTGTTAC TAAGGTGCCG
GCGTTTAAAG GCTTTTCTGC CAAAGACATC GAATTACCCA ATCCGCCACA GGCGACGGAA
GAAGTGATCA ATGGCGTACG CTTCCGCGTA TTTACCATCC GTAAAACACT GCTGTTCCCA
TTACAATCCG GTACCCTGGA ACTGGACCCG GTAGAAGTGG ATAACCATGT ACGGCTGGTA
AAACTCGTCA AGAACAATAA CAAACGCGCA AGAGACCCGT TTGCAGATCT GTTTAATGAC
CCGTCTCTTA AAGATCCTTT TGATGATCCG TTCTTTGACG ACATCTTTAA TCGTCCTGAA
GTGACTTATG AGGATGTACC GTATAAAATA CAAACGGCTC CTGTAAAGGT GACGGTGAAA
CCGCTCCCTC TTGATACCCG CCCTGCCAGT TTTGCCGGTG CTGTGGGTAA ATTCAATATG
ACGGCTACCA TCGACAAGAC AAACCTGAGC ACAGATGACG CGCTGACCCT GAAAGTGATC
GTATCGGGTC AGGGGAACGT AAACCTGCTG AACGGACCTA AAGTCGATGT ACCGGCAGGT
TTCGAAAAAT ACGATCCGAA GGTGACCGAC AATATTGAGA AAAACAGCAA CCCTTTATCA
GGCTCCCGCC AGTTTGAATA TGTGCTGATG CCACAGGAAG CAGGCGATCA GACGATTGCG
CCGGTGGAAT TCTCTTATTT CGACATCGCC TCCAACAGCT ACAAAACTAT CCGCTCTGAA
GCTTTTGCTG TTCATGTCAC GCCTGGTAAG CAGACCAAAC GTGAAAAAGA AGATTTCAGC
GTCAACAGAA ATACAATTAC GCCCAACTAC AACGGTGTAC TCAACTGGGT GAAACAAGGC
AGTTTCCTGC TGGTCAGCCC ATTGTTCTAC ATATTACTGC TGCTGCCTTT ACTGGCGCTC
GTTGCTGCGC TGATCTACCG CCACAAAAGA AACTACCAGC AAAACAATGC TGCATTCCTC
AAGTACCGCT ACGCCAACAA AGTGGCCCTG AAACGGCTTG AACTGGCGGC CCGTTATCTG
AAAGAAGACA AAGACAAGGC ATTTTATGAA GAAACGTCCA GGGCGATCTG GGGATATCTG
AGTAATAAAC TGCATGTGCC TTTCGCAGAT CTCAGTAAAC AGCTGATCCA GGACAAACTT
GCACAGCAAC AGGTGAGCGA ACAATATACT GCCAAACTGT TTGACCTGCT GGACGACTGT
GAAATGGCCC TGTATACACC CATGCACAAC AATGACAGGA TGCAGGGTAC TTATCAACAG
GCGGTTGAGG TCATCAGCCA ACTGGAAGAA GAACTTCAGC GTGCAAAAAG CGTAGTATAA
 
Protein sequence
MNVTTVSIKK FVLSLFFCLG AITCLQAQEF RFTTSVSSNK VAVDEPFQIQ FMLENAPNVT 
SFTPPAFNDF EILQGPSQMQ GQSIMNGRRS EYIALIYVVQ PKRVGNFTLP GATARSDGKV
VRSNPVTIEV LKSNSGRGQA PQQTAPQQNY PQTRAQRQQQ QQDEMEGVLR NGEDINAKLK
KNIFVKVDVD KTSLYEGEQL TATYKLYTRL PTNSSVTKVP AFKGFSAKDI ELPNPPQATE
EVINGVRFRV FTIRKTLLFP LQSGTLELDP VEVDNHVRLV KLVKNNNKRA RDPFADLFND
PSLKDPFDDP FFDDIFNRPE VTYEDVPYKI QTAPVKVTVK PLPLDTRPAS FAGAVGKFNM
TATIDKTNLS TDDALTLKVI VSGQGNVNLL NGPKVDVPAG FEKYDPKVTD NIEKNSNPLS
GSRQFEYVLM PQEAGDQTIA PVEFSYFDIA SNSYKTIRSE AFAVHVTPGK QTKREKEDFS
VNRNTITPNY NGVLNWVKQG SFLLVSPLFY ILLLLPLLAL VAALIYRHKR NYQQNNAAFL
KYRYANKVAL KRLELAARYL KEDKDKAFYE ETSRAIWGYL SNKLHVPFAD LSKQLIQDKL
AQQQVSEQYT AKLFDLLDDC EMALYTPMHN NDRMQGTYQQ AVEVISQLEE ELQRAKSVV