Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0669 |
Symbol | |
ID | 8356781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 809496 |
End bp | 811475 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962821 |
Product | hypothetical protein |
Protein accession | YP_003120368 |
Protein GI | 256419715 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTCA CTACTGTTAG TATAAAGAAG TTTGTATTAT CCCTGTTCTT TTGTCTGGGC GCAATTACGT GCCTGCAGGC GCAGGAATTC AGGTTCACTA CCAGCGTCAG CAGTAATAAG GTCGCGGTGG ATGAACCGTT TCAGATACAA TTCATGCTGG AAAATGCGCC AAACGTTACC AGCTTTACAC CTCCGGCTTT CAATGATTTT GAAATCCTGC AAGGGCCATC CCAGATGCAG GGGCAGTCTA TTATGAACGG ACGCCGTTCC GAATACATTG CGCTGATCTA TGTAGTCCAG CCCAAAAGGG TAGGTAACTT TACCCTGCCG GGAGCCACAG CCCGTTCCGA CGGGAAAGTC GTGCGCTCTA ACCCGGTCAC TATTGAGGTG TTAAAATCCA ATTCCGGTCG TGGTCAGGCG CCCCAGCAGA CGGCTCCGCA ACAGAATTAT CCGCAAACCC GGGCACAGCG TCAGCAGCAA CAGCAGGACG AAATGGAAGG CGTACTCCGG AATGGAGAAG ACATCAACGC AAAACTGAAA AAGAATATTT TCGTAAAGGT AGATGTGGAT AAGACCTCCC TGTATGAGGG CGAGCAACTG ACCGCTACCT ATAAATTATA TACCCGGCTC CCGACCAACT CCAGTGTTAC TAAGGTGCCG GCGTTTAAAG GCTTTTCTGC CAAAGACATC GAATTACCCA ATCCGCCACA GGCGACGGAA GAAGTGATCA ATGGCGTACG CTTCCGCGTA TTTACCATCC GTAAAACACT GCTGTTCCCA TTACAATCCG GTACCCTGGA ACTGGACCCG GTAGAAGTGG ATAACCATGT ACGGCTGGTA AAACTCGTCA AGAACAATAA CAAACGCGCA AGAGACCCGT TTGCAGATCT GTTTAATGAC CCGTCTCTTA AAGATCCTTT TGATGATCCG TTCTTTGACG ACATCTTTAA TCGTCCTGAA GTGACTTATG AGGATGTACC GTATAAAATA CAAACGGCTC CTGTAAAGGT GACGGTGAAA CCGCTCCCTC TTGATACCCG CCCTGCCAGT TTTGCCGGTG CTGTGGGTAA ATTCAATATG ACGGCTACCA TCGACAAGAC AAACCTGAGC ACAGATGACG CGCTGACCCT GAAAGTGATC GTATCGGGTC AGGGGAACGT AAACCTGCTG AACGGACCTA AAGTCGATGT ACCGGCAGGT TTCGAAAAAT ACGATCCGAA GGTGACCGAC AATATTGAGA AAAACAGCAA CCCTTTATCA GGCTCCCGCC AGTTTGAATA TGTGCTGATG CCACAGGAAG CAGGCGATCA GACGATTGCG CCGGTGGAAT TCTCTTATTT CGACATCGCC TCCAACAGCT ACAAAACTAT CCGCTCTGAA GCTTTTGCTG TTCATGTCAC GCCTGGTAAG CAGACCAAAC GTGAAAAAGA AGATTTCAGC GTCAACAGAA ATACAATTAC GCCCAACTAC AACGGTGTAC TCAACTGGGT GAAACAAGGC AGTTTCCTGC TGGTCAGCCC ATTGTTCTAC ATATTACTGC TGCTGCCTTT ACTGGCGCTC GTTGCTGCGC TGATCTACCG CCACAAAAGA AACTACCAGC AAAACAATGC TGCATTCCTC AAGTACCGCT ACGCCAACAA AGTGGCCCTG AAACGGCTTG AACTGGCGGC CCGTTATCTG AAAGAAGACA AAGACAAGGC ATTTTATGAA GAAACGTCCA GGGCGATCTG GGGATATCTG AGTAATAAAC TGCATGTGCC TTTCGCAGAT CTCAGTAAAC AGCTGATCCA GGACAAACTT GCACAGCAAC AGGTGAGCGA ACAATATACT GCCAAACTGT TTGACCTGCT GGACGACTGT GAAATGGCCC TGTATACACC CATGCACAAC AATGACAGGA TGCAGGGTAC TTATCAACAG GCGGTTGAGG TCATCAGCCA ACTGGAAGAA GAACTTCAGC GTGCAAAAAG CGTAGTATAA
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Protein sequence | MNVTTVSIKK FVLSLFFCLG AITCLQAQEF RFTTSVSSNK VAVDEPFQIQ FMLENAPNVT SFTPPAFNDF EILQGPSQMQ GQSIMNGRRS EYIALIYVVQ PKRVGNFTLP GATARSDGKV VRSNPVTIEV LKSNSGRGQA PQQTAPQQNY PQTRAQRQQQ QQDEMEGVLR NGEDINAKLK KNIFVKVDVD KTSLYEGEQL TATYKLYTRL PTNSSVTKVP AFKGFSAKDI ELPNPPQATE EVINGVRFRV FTIRKTLLFP LQSGTLELDP VEVDNHVRLV KLVKNNNKRA RDPFADLFND PSLKDPFDDP FFDDIFNRPE VTYEDVPYKI QTAPVKVTVK PLPLDTRPAS FAGAVGKFNM TATIDKTNLS TDDALTLKVI VSGQGNVNLL NGPKVDVPAG FEKYDPKVTD NIEKNSNPLS GSRQFEYVLM PQEAGDQTIA PVEFSYFDIA SNSYKTIRSE AFAVHVTPGK QTKREKEDFS VNRNTITPNY NGVLNWVKQG SFLLVSPLFY ILLLLPLLAL VAALIYRHKR NYQQNNAAFL KYRYANKVAL KRLELAARYL KEDKDKAFYE ETSRAIWGYL SNKLHVPFAD LSKQLIQDKL AQQQVSEQYT AKLFDLLDDC EMALYTPMHN NDRMQGTYQQ AVEVISQLEE ELQRAKSVV
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