Gene Cpin_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0617 
Symbol 
ID8356728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp755865 
End bp756719 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content47% 
IMG OID644962768 
Productfatty acid hydroxylase 
Protein accessionYP_003120316 
Protein GI256419663 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACCCA TCCATGCAGA CAAAACTGAT TCCCGTATGG AAGAATTTTT TAATAATATT 
CCTCCGTGGT ATCGCACCGC CTTTCTCGTA GGTGGACTCG TACTTCTCTG GATGATCGAA
GGCGCTATAC CCCGCCTCTC ATTCAAAGGA GATCGTTATA AACATGCAGG TACCAATTTG
TTCTTTACGT TAACCACAGC CGTCGTTAAC CTTGGTTTCG CATTCCTGAT CGTCACCGCA
TCAGAATGGA CCGCAAAGGC ACATTTTGGC CTGTTGTACA CCTTTCCGCT GCCCATCTGG
CTACACTGCC TGATAGCGGT CATGATGATG GATCTGGTAG GCGCTTACCT CGTACACGTC
ATCCAGCATA AAATAGCCTG GATGTGGCAC TTCCATAAGA TCCATCATAT CGATACAGCG
GTAGATACCA CTACCGCCCT GAGACACCAT CCCGTGGAAA GCATTTTCAG AGTTATCGCC
TTACTGCTCG CCATTGTTGT AATGGGCATA CCCATCTGGA TGGTCATGTT ATACCAGACC
ATCTCAGCGT TCATGTCACA GTTTAACCAT GCGAACATCC GTCTGCCCAA ATGGCTGGAT
AGTACCCTTA GCTACGTCAT TGTATCGCCT GACATGCATA AGGTACATCA CAGTCATTAT
CAGCCGGAAA CCGACTCCAA TTATGCGAAC ATTTTCTCGT TCTGGGATCG CCTCTTCGGC
ACATTCGTGA AAGTAAAAGA TGTAACGCAA CTACGCTACG GACTGGATGA GTATCAGGAC
GATCATTATC AACACATCGG GACACTCCTG AAAGTGCCCT GGGAACAAAC CAGGCAGGAA
AAGATTATAA ACTAA
 
Protein sequence
MGPIHADKTD SRMEEFFNNI PPWYRTAFLV GGLVLLWMIE GAIPRLSFKG DRYKHAGTNL 
FFTLTTAVVN LGFAFLIVTA SEWTAKAHFG LLYTFPLPIW LHCLIAVMMM DLVGAYLVHV
IQHKIAWMWH FHKIHHIDTA VDTTTALRHH PVESIFRVIA LLLAIVVMGI PIWMVMLYQT
ISAFMSQFNH ANIRLPKWLD STLSYVIVSP DMHKVHHSHY QPETDSNYAN IFSFWDRLFG
TFVKVKDVTQ LRYGLDEYQD DHYQHIGTLL KVPWEQTRQE KIIN