Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0617 |
Symbol | |
ID | 8356728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 755865 |
End bp | 756719 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962768 |
Product | fatty acid hydroxylase |
Protein accession | YP_003120316 |
Protein GI | 256419663 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACCCA TCCATGCAGA CAAAACTGAT TCCCGTATGG AAGAATTTTT TAATAATATT CCTCCGTGGT ATCGCACCGC CTTTCTCGTA GGTGGACTCG TACTTCTCTG GATGATCGAA GGCGCTATAC CCCGCCTCTC ATTCAAAGGA GATCGTTATA AACATGCAGG TACCAATTTG TTCTTTACGT TAACCACAGC CGTCGTTAAC CTTGGTTTCG CATTCCTGAT CGTCACCGCA TCAGAATGGA CCGCAAAGGC ACATTTTGGC CTGTTGTACA CCTTTCCGCT GCCCATCTGG CTACACTGCC TGATAGCGGT CATGATGATG GATCTGGTAG GCGCTTACCT CGTACACGTC ATCCAGCATA AAATAGCCTG GATGTGGCAC TTCCATAAGA TCCATCATAT CGATACAGCG GTAGATACCA CTACCGCCCT GAGACACCAT CCCGTGGAAA GCATTTTCAG AGTTATCGCC TTACTGCTCG CCATTGTTGT AATGGGCATA CCCATCTGGA TGGTCATGTT ATACCAGACC ATCTCAGCGT TCATGTCACA GTTTAACCAT GCGAACATCC GTCTGCCCAA ATGGCTGGAT AGTACCCTTA GCTACGTCAT TGTATCGCCT GACATGCATA AGGTACATCA CAGTCATTAT CAGCCGGAAA CCGACTCCAA TTATGCGAAC ATTTTCTCGT TCTGGGATCG CCTCTTCGGC ACATTCGTGA AAGTAAAAGA TGTAACGCAA CTACGCTACG GACTGGATGA GTATCAGGAC GATCATTATC AACACATCGG GACACTCCTG AAAGTGCCCT GGGAACAAAC CAGGCAGGAA AAGATTATAA ACTAA
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Protein sequence | MGPIHADKTD SRMEEFFNNI PPWYRTAFLV GGLVLLWMIE GAIPRLSFKG DRYKHAGTNL FFTLTTAVVN LGFAFLIVTA SEWTAKAHFG LLYTFPLPIW LHCLIAVMMM DLVGAYLVHV IQHKIAWMWH FHKIHHIDTA VDTTTALRHH PVESIFRVIA LLLAIVVMGI PIWMVMLYQT ISAFMSQFNH ANIRLPKWLD STLSYVIVSP DMHKVHHSHY QPETDSNYAN IFSFWDRLFG TFVKVKDVTQ LRYGLDEYQD DHYQHIGTLL KVPWEQTRQE KIIN
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