Gene Cpin_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0583 
Symbol 
ID8356693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp710810 
End bp713458 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content36% 
IMG OID644962733 
Producthypothetical protein 
Protein accessionYP_003120282 
Protein GI256419629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTACTAA AAAATGGGGA AATAATCTTG AAGCAGAAAA TCAGAAGTCT CATTAATCAA 
TTTATTGGAA ACTTAAATAT TGAAGAGAAA AAAATCTCCG TTAAAGATTT AAGTATTTTC
TTTTCTGTTT TGTTAGCCAC CTTCTCCCTC AGAAAAAATA GCGGTTTAAA AATAGACTCA
GAGTATGCAT CTTATCGTTC CGCATTTGCG TCTGAATTTG AACTTATACA ACAGCGATTT
CCGGAACTGA TGGATATTTT TTCTCTGATT GAATCCCAGA TCAGAACTGA ACTCCTTATC
AATATTTTTG AAAAATTAGA CGCTATATAT CAGGAAGAAG ACGGCGATCT TGATGACATC
ATTTCCTGGT CTTATCAATA CCTGAAAAGA GATTTGGAAA AAGCCGCTTT TAAAAAGGTG
GGACAAGACA ATGTAAAAAT TAAAAATTCA GATTTACTAT TCACAACGCA GTTTTTTACT
GACAAGTACA TGGTAAAATA CATTGTCACC CAGGCGCTTT CCGGGTTTAA GGGAGCGCGT
ATTCGTGATG TTGTTCTCAT TGATTGTGCC TCCGGAGGAG GAAATTTCCT GACTTACGGA
TTTAATATTC TTTTCAGGCT TTATCAACAA ACATTCCCTT CCTGGTCAAA CCAGGCTATC
GTAGATGTAT TATTGCAGGA GGCTATAACA GGCTATGATT TAGATAATAA CTTATCAAAA
ATCGCAGCAC TCTCCCTGTT TGTGAAAGCA TCAATTTATG CAATACCTTC TCCGGCAACT
ACAATCAATA TCTATGGTGG ACAGGCGGAT GACAATCTGG GCTTTTTAAA CCCTGATATT
ATTTCTGATA CCATTGGAGC ATTGACTTTC AGAACCCGGT TAGACAAAAT CGATAAAGCT
GGAAAAATAA AAGTGTTCTT AACAAATCCT CCGTTTATGG GCAAAAGGGA TATGGACACT
TCACTAAAAA ACTATCTCCA AAAAAACATT CCTGAAAGCA AGGGAGATCT TTGTGTATCC
TTCATTCAGA GAATCATCCA GGAGATGAAT GGCCATGACA GACTTGGCGT TGTATCTCAA
AACAATTGGT TGTATTTATC TTCCTTTAGT GATTTCAGGA AAATGTTTCT TGAAAAAGAA
ACGCTCATAG AATGTGTTGA TTTGGGAAGC AATGCATTTG AAGATATAAA GGGTGAAAAA
ACGAATATAG CGCTATTTAT TATTGGCGAC TCTTCCGACA AAACGACTCA CTTTTATAAT
TTAAAAAATC TCAGCTACCA TGAGAAGAAA AAAATGGTAT CGGACAAAGC TTTCCCAATA
GATTTAACTT TTTCATTAGC ACAGCACCAA TTTTTAAAAA ATAACAATTT CGAGTTCAAC
TATCATCTTG AACATAGATT TGAGAATATT CAAAAATTAG ATTTATACGC TAATTTTGGC
TCCCCGATGC AGGGTACATC AACGGGCAAC AATGCCGAGT TTGTGAAATT TGCCTGGGAA
GTCAATGGAA ATCCTGACTG GAAACTTGTA AGTAAAGGAG GGGGGTTCAG CAAGTGGATG
GGATTGAACT ACTATAAGGT AAACTGGGGA ACAAATGCAG AAAAAATAAA ATCTAATAAG
GGTAGTGCGT TGAGAAACAT TGACAAAATC CCCAACACAC AACTCGTATA TAGCGATACA
GGCACACTAG GGTTAAATGT AAGAATATTA AAAGAAAACC AGGTTTTCAT TGCATCAGGT
CCAGGGATCA TCGTTTCGTC CGGCGACATG TATGCACACC TTGCCTTTCT AAATTCAAAA
GTTGCAACAT TCCTGCTGAA ACTTATCAAT CCTAAGTTTA CCATTAGTGC AGGTTATATT
TCAAAAATAC CTGTAGCGCC GAACATCCTT AACGATACAT TTATTGCAGA CCTGAGCAGA
AAATGTCTTG CGTTAAAAGA GGAATACCTC AAGGGCAAGT TGCCCAACAT TGAATTTGAG
CATCAGGAAT ACCATCTTAT CAAAGACCTG GATGCACACC TTAAACATTG TATACTATCG
GATCTGCAAA ATGATTATCA ACGCCTGTTA CTGGAGTCAG AAATCGAAGC AGCCATCAGA
AAGCAATATA ATTTTGATGA AAAAGAGCTG AAGGAACTGA ATAGCGTTGT AGGAGAGTTA
GCCGTCTTCA ATAAAAAGAA GATGGAGGAA ACTGACATTG AAAAATTAGA TATGCTTTTG
TCGAAAACTA TGGATATAAA TTGTTTTTCG TCAAGTAAGT CCATCAATGG GTTTTCAGTC
GGTAGTGAGT CTATATTGGA AGACCTGTCT TATAAACTAG ACACAAATCC TTCATTCATT
CTTTCTTTTA TAAAAAAGAA TATATCGCAG TTTAAAACGA CCAAAGCAAA GTATTTTAAT
GATCTGTTAC ACAAAATCAT GCTGTACGAA TTGGGCGTAA AACAAATATT CACTTATAAA
TCTCAGGTGG TAAGTATAGA AAGTTTAATC AGGTCCTTGA AAAAATATAC TTTTCTGGCA
AAACGGGACG ATCTGTTATC ATTGATTACC CCTATTTTGT TAAAGCATCA CCAAACAAGC
TTTTTTAATA AACCCCTGAT ATCACTTTCC GGGGAAAGTT TAACTATCGG ATATTCACAC
AATGGATAA
 
Protein sequence
MLLKNGEIIL KQKIRSLINQ FIGNLNIEEK KISVKDLSIF FSVLLATFSL RKNSGLKIDS 
EYASYRSAFA SEFELIQQRF PELMDIFSLI ESQIRTELLI NIFEKLDAIY QEEDGDLDDI
ISWSYQYLKR DLEKAAFKKV GQDNVKIKNS DLLFTTQFFT DKYMVKYIVT QALSGFKGAR
IRDVVLIDCA SGGGNFLTYG FNILFRLYQQ TFPSWSNQAI VDVLLQEAIT GYDLDNNLSK
IAALSLFVKA SIYAIPSPAT TINIYGGQAD DNLGFLNPDI ISDTIGALTF RTRLDKIDKA
GKIKVFLTNP PFMGKRDMDT SLKNYLQKNI PESKGDLCVS FIQRIIQEMN GHDRLGVVSQ
NNWLYLSSFS DFRKMFLEKE TLIECVDLGS NAFEDIKGEK TNIALFIIGD SSDKTTHFYN
LKNLSYHEKK KMVSDKAFPI DLTFSLAQHQ FLKNNNFEFN YHLEHRFENI QKLDLYANFG
SPMQGTSTGN NAEFVKFAWE VNGNPDWKLV SKGGGFSKWM GLNYYKVNWG TNAEKIKSNK
GSALRNIDKI PNTQLVYSDT GTLGLNVRIL KENQVFIASG PGIIVSSGDM YAHLAFLNSK
VATFLLKLIN PKFTISAGYI SKIPVAPNIL NDTFIADLSR KCLALKEEYL KGKLPNIEFE
HQEYHLIKDL DAHLKHCILS DLQNDYQRLL LESEIEAAIR KQYNFDEKEL KELNSVVGEL
AVFNKKKMEE TDIEKLDMLL SKTMDINCFS SSKSINGFSV GSESILEDLS YKLDTNPSFI
LSFIKKNISQ FKTTKAKYFN DLLHKIMLYE LGVKQIFTYK SQVVSIESLI RSLKKYTFLA
KRDDLLSLIT PILLKHHQTS FFNKPLISLS GESLTIGYSH NG