Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0583 |
Symbol | |
ID | 8356693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 710810 |
End bp | 713458 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644962733 |
Product | hypothetical protein |
Protein accession | YP_003120282 |
Protein GI | 256419629 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTACTAA AAAATGGGGA AATAATCTTG AAGCAGAAAA TCAGAAGTCT CATTAATCAA TTTATTGGAA ACTTAAATAT TGAAGAGAAA AAAATCTCCG TTAAAGATTT AAGTATTTTC TTTTCTGTTT TGTTAGCCAC CTTCTCCCTC AGAAAAAATA GCGGTTTAAA AATAGACTCA GAGTATGCAT CTTATCGTTC CGCATTTGCG TCTGAATTTG AACTTATACA ACAGCGATTT CCGGAACTGA TGGATATTTT TTCTCTGATT GAATCCCAGA TCAGAACTGA ACTCCTTATC AATATTTTTG AAAAATTAGA CGCTATATAT CAGGAAGAAG ACGGCGATCT TGATGACATC ATTTCCTGGT CTTATCAATA CCTGAAAAGA GATTTGGAAA AAGCCGCTTT TAAAAAGGTG GGACAAGACA ATGTAAAAAT TAAAAATTCA GATTTACTAT TCACAACGCA GTTTTTTACT GACAAGTACA TGGTAAAATA CATTGTCACC CAGGCGCTTT CCGGGTTTAA GGGAGCGCGT ATTCGTGATG TTGTTCTCAT TGATTGTGCC TCCGGAGGAG GAAATTTCCT GACTTACGGA TTTAATATTC TTTTCAGGCT TTATCAACAA ACATTCCCTT CCTGGTCAAA CCAGGCTATC GTAGATGTAT TATTGCAGGA GGCTATAACA GGCTATGATT TAGATAATAA CTTATCAAAA ATCGCAGCAC TCTCCCTGTT TGTGAAAGCA TCAATTTATG CAATACCTTC TCCGGCAACT ACAATCAATA TCTATGGTGG ACAGGCGGAT GACAATCTGG GCTTTTTAAA CCCTGATATT ATTTCTGATA CCATTGGAGC ATTGACTTTC AGAACCCGGT TAGACAAAAT CGATAAAGCT GGAAAAATAA AAGTGTTCTT AACAAATCCT CCGTTTATGG GCAAAAGGGA TATGGACACT TCACTAAAAA ACTATCTCCA AAAAAACATT CCTGAAAGCA AGGGAGATCT TTGTGTATCC TTCATTCAGA GAATCATCCA GGAGATGAAT GGCCATGACA GACTTGGCGT TGTATCTCAA AACAATTGGT TGTATTTATC TTCCTTTAGT GATTTCAGGA AAATGTTTCT TGAAAAAGAA ACGCTCATAG AATGTGTTGA TTTGGGAAGC AATGCATTTG AAGATATAAA GGGTGAAAAA ACGAATATAG CGCTATTTAT TATTGGCGAC TCTTCCGACA AAACGACTCA CTTTTATAAT TTAAAAAATC TCAGCTACCA TGAGAAGAAA AAAATGGTAT CGGACAAAGC TTTCCCAATA GATTTAACTT TTTCATTAGC ACAGCACCAA TTTTTAAAAA ATAACAATTT CGAGTTCAAC TATCATCTTG AACATAGATT TGAGAATATT CAAAAATTAG ATTTATACGC TAATTTTGGC TCCCCGATGC AGGGTACATC AACGGGCAAC AATGCCGAGT TTGTGAAATT TGCCTGGGAA GTCAATGGAA ATCCTGACTG GAAACTTGTA AGTAAAGGAG GGGGGTTCAG CAAGTGGATG GGATTGAACT ACTATAAGGT AAACTGGGGA ACAAATGCAG AAAAAATAAA ATCTAATAAG GGTAGTGCGT TGAGAAACAT TGACAAAATC CCCAACACAC AACTCGTATA TAGCGATACA GGCACACTAG GGTTAAATGT AAGAATATTA AAAGAAAACC AGGTTTTCAT TGCATCAGGT CCAGGGATCA TCGTTTCGTC CGGCGACATG TATGCACACC TTGCCTTTCT AAATTCAAAA GTTGCAACAT TCCTGCTGAA ACTTATCAAT CCTAAGTTTA CCATTAGTGC AGGTTATATT TCAAAAATAC CTGTAGCGCC GAACATCCTT AACGATACAT TTATTGCAGA CCTGAGCAGA AAATGTCTTG CGTTAAAAGA GGAATACCTC AAGGGCAAGT TGCCCAACAT TGAATTTGAG CATCAGGAAT ACCATCTTAT CAAAGACCTG GATGCACACC TTAAACATTG TATACTATCG GATCTGCAAA ATGATTATCA ACGCCTGTTA CTGGAGTCAG AAATCGAAGC AGCCATCAGA AAGCAATATA ATTTTGATGA AAAAGAGCTG AAGGAACTGA ATAGCGTTGT AGGAGAGTTA GCCGTCTTCA ATAAAAAGAA GATGGAGGAA ACTGACATTG AAAAATTAGA TATGCTTTTG TCGAAAACTA TGGATATAAA TTGTTTTTCG TCAAGTAAGT CCATCAATGG GTTTTCAGTC GGTAGTGAGT CTATATTGGA AGACCTGTCT TATAAACTAG ACACAAATCC TTCATTCATT CTTTCTTTTA TAAAAAAGAA TATATCGCAG TTTAAAACGA CCAAAGCAAA GTATTTTAAT GATCTGTTAC ACAAAATCAT GCTGTACGAA TTGGGCGTAA AACAAATATT CACTTATAAA TCTCAGGTGG TAAGTATAGA AAGTTTAATC AGGTCCTTGA AAAAATATAC TTTTCTGGCA AAACGGGACG ATCTGTTATC ATTGATTACC CCTATTTTGT TAAAGCATCA CCAAACAAGC TTTTTTAATA AACCCCTGAT ATCACTTTCC GGGGAAAGTT TAACTATCGG ATATTCACAC AATGGATAA
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Protein sequence | MLLKNGEIIL KQKIRSLINQ FIGNLNIEEK KISVKDLSIF FSVLLATFSL RKNSGLKIDS EYASYRSAFA SEFELIQQRF PELMDIFSLI ESQIRTELLI NIFEKLDAIY QEEDGDLDDI ISWSYQYLKR DLEKAAFKKV GQDNVKIKNS DLLFTTQFFT DKYMVKYIVT QALSGFKGAR IRDVVLIDCA SGGGNFLTYG FNILFRLYQQ TFPSWSNQAI VDVLLQEAIT GYDLDNNLSK IAALSLFVKA SIYAIPSPAT TINIYGGQAD DNLGFLNPDI ISDTIGALTF RTRLDKIDKA GKIKVFLTNP PFMGKRDMDT SLKNYLQKNI PESKGDLCVS FIQRIIQEMN GHDRLGVVSQ NNWLYLSSFS DFRKMFLEKE TLIECVDLGS NAFEDIKGEK TNIALFIIGD SSDKTTHFYN LKNLSYHEKK KMVSDKAFPI DLTFSLAQHQ FLKNNNFEFN YHLEHRFENI QKLDLYANFG SPMQGTSTGN NAEFVKFAWE VNGNPDWKLV SKGGGFSKWM GLNYYKVNWG TNAEKIKSNK GSALRNIDKI PNTQLVYSDT GTLGLNVRIL KENQVFIASG PGIIVSSGDM YAHLAFLNSK VATFLLKLIN PKFTISAGYI SKIPVAPNIL NDTFIADLSR KCLALKEEYL KGKLPNIEFE HQEYHLIKDL DAHLKHCILS DLQNDYQRLL LESEIEAAIR KQYNFDEKEL KELNSVVGEL AVFNKKKMEE TDIEKLDMLL SKTMDINCFS SSKSINGFSV GSESILEDLS YKLDTNPSFI LSFIKKNISQ FKTTKAKYFN DLLHKIMLYE LGVKQIFTYK SQVVSIESLI RSLKKYTFLA KRDDLLSLIT PILLKHHQTS FFNKPLISLS GESLTIGYSH NG
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