| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0349 |
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| Symbol | |
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| ID | 8356454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 413682 |
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| End bp | 416234 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962495 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003120049 |
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| Protein GI | 256419396 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATCT TTACTATCAT TATTCTACTG CTGTTGACAG GCTACTACGC GCCGGCACAG
TCGCAGGAAA GGGATTCCCT TACCCTGCGA CGGCTGGGTG AAGTACAGAT AGTAGGTTCC
CGCAGCGTGA CGCGCACACG TTTAAATGCG CCTGTACCGG TAGATATTAT TGACCTCAGA
TCTTTACAGG AAAACGCCCC ACAAATCAGC CTGACGCAGT TGCTGCAATA TATCTCCCCT
TCCTTTCACT CTGTGAATGG CAGCAACGCC GGCGATGCCG GGTCTGCACT CAATCTCGCA
CAATTAAAAG GATTGGGTGT GGATCAGCTG CTGGTGCTTG TGAATGGTAA AAGAAGACAT
AAAAGCTCTA ATGTGAACTG GGGTGGACTG GGTAACGGTG CTACCGGCTA CGATCTGAAT
GCGATTCCTG CCGGCGCCAT TGAGCGCATA GAAATACTCC GGGATGGCGC TGCCGCGCAA
TACGGTTCAG ATGCCATTGC GGGTGTGATC AATGTCGTGC TTAAAAAATC AACCGATGAT
ATTACAATCA GTTCTACCGC CAGTGTACGC CGGCGGGGAG ATGGATTAAC GACGCGTACC
AGCACCGGAT ATGGTTTTAA ACTGGGCGAT AATGGCGGAT ACCTGCGCCT GACTGCAGAA
TTTGCCACAC AGGCAGTTGC ACTGCCTGCC GGTAAAACAG ATGCAGGTCT GTACAATGGT
CCTATCTATG GCGGCGGCGC TAATACCCGT GGCTATGATG CGATCTATAC AAAGGAAACA
GATGATGCCA TATTAGTCAG CCGTGGTATC GACCGGCATT ACTTTGATCA GCGTGGCGGT
GGTGCTAACA GGGCGAAAGA TGCCCTGCTG TCATTCAACG CAGCTATTCC CCTGAAAGAA
GGTGTAGAGC TATACACATT CGGTGGTATC AGTCATCGTA ATTCAGAATT TACAGCGGTA
TACCGCTTGC CGGGATGGAC AGAAAGAAAT AACGCCTTCC TCTACCCTGA TGGCTTTTTG
CCCGAAATGG ACAATACCAT CACAGATAAA TCAATTGCTA TTGGCGTAAA AGGAAAGATA
GGACAGTGGA CAACCGATCT TTCAAACGTA TACGGAAAGA ATGATTTCGG AAATGTCATT
GACAACTCAT TGAATGCAAG CTATGGACTG AAGAGTCCCA CCACTTTTGA TGCCGGCCGG
TATAACGCAT CCCAGAATAC CGCTGGCCTT GACATCTCCC GGTATTTTGA ACATGCGTTG
CAAGGTATCA ATGTGGCCTT TGGCGGACAG TACCGGGTAG AAACCTATCA GATCATCGCA
GGAGAAGAAG CCTCCTATGC AAAGGCCGAT CTGCGTACCA TCTATAATAT AGATACAACG
GCGGCAGGCG TGCCTTACCA GTCTGCCGCA GGTCTGATCG CATTGAACGG CCTCTCCCCT
GGTTCTCAGA TCCATGCAGG TTTTCGTCCT GCGAATGAAG TAAATGTCAA CCGTGCTGTA
ACGGCCGGTT ATGTAGATAT TGAGGCAAAC ATCACCCGTC GGTGGTTATT GTCTGCCGCC
GTAAGAGCAG AGCATTTCTC TGACTTCGGT AACGTAACTA CCTGGAAAGT AGCCAGTCGT
TATAGCCTTG CTAAATGGCT AGCTTTCCGG GGAGCCTATA ACATGGGCTT CCGCGCTCCC
GATCTGGCGC AATTCTATTA CACAGAAACG TCTACGACTT TCCAGCAGGG CCGTGCTGTT
GACCTGGTCA CCGCTTCTAA CAAAAGCGCC GCAGCGCGGG CATTGGGTAT TCCATCGCTG
ACGCCGGAGC GTTCAAGAGG ATTCAGTGCC GGTATCACAT CAGAACCTGC ACCAAGAGCG
GAACTCAGCA TAGACGCTTA TCATGTGGAG ATAGACAACC GCGTAGGCAA TACAGGCAAT
TTCTCTGCAC TGGATACAAA TCTGCCGGAG GATGTAAGAA GCCTCTTATT ACAGACAGGC
ACTACACAGG CTAAATTCTT CTACAATGCT TTCAGTACCC GTACGAAAGG GATTGAGTTC
ACGGGTAGTT ATAAAATACT GTTGAATAAA GGTTCCTTAT CATTCCTCGC AGGTGCGAAT
TTCTCTAAGA ATGAAGTAAG CGGCGTGAAT ACGCCAAAGG GCCTGGAGAC GTATCGTTAT
GTCATCTTCA GCGAAGCAGA AAGAGCCAGG GTAACGACTA ATATTCCGCA GCAGAAGGTT
ACCCTGCAGG GTATTTATAA TTCACGCAAA TGGAACCTGT TATTGCGTAC TGTTTATTTC
GGCACTGTTA CTACGGCTAC AGCGTTGAAT GCTACCTTTC CCCGCCCGGA TTATTTCTTC
CAGAAACTGC CTGCGATATG GGTAACCGAT CTTTCAGTCG GCTATCATAT TACGCCGCAG
TTGCTGGCCA CCATTGGTGT CAACAATGCA TTTGATGTAT TGGGTGATTA CACCGCGCCG
GCAGTTTCAG GGTTGCGTAA TCCTACTGTA GTCGGTATCC AGAATGGCAG TGCCGGCGTG
CAGCCTTTCG CCAGACTCCT GGCTAAATTT TAA
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| Protein sequence | MRIFTIIILL LLTGYYAPAQ SQERDSLTLR RLGEVQIVGS RSVTRTRLNA PVPVDIIDLR
SLQENAPQIS LTQLLQYISP SFHSVNGSNA GDAGSALNLA QLKGLGVDQL LVLVNGKRRH
KSSNVNWGGL GNGATGYDLN AIPAGAIERI EILRDGAAAQ YGSDAIAGVI NVVLKKSTDD
ITISSTASVR RRGDGLTTRT STGYGFKLGD NGGYLRLTAE FATQAVALPA GKTDAGLYNG
PIYGGGANTR GYDAIYTKET DDAILVSRGI DRHYFDQRGG GANRAKDALL SFNAAIPLKE
GVELYTFGGI SHRNSEFTAV YRLPGWTERN NAFLYPDGFL PEMDNTITDK SIAIGVKGKI
GQWTTDLSNV YGKNDFGNVI DNSLNASYGL KSPTTFDAGR YNASQNTAGL DISRYFEHAL
QGINVAFGGQ YRVETYQIIA GEEASYAKAD LRTIYNIDTT AAGVPYQSAA GLIALNGLSP
GSQIHAGFRP ANEVNVNRAV TAGYVDIEAN ITRRWLLSAA VRAEHFSDFG NVTTWKVASR
YSLAKWLAFR GAYNMGFRAP DLAQFYYTET STTFQQGRAV DLVTASNKSA AARALGIPSL
TPERSRGFSA GITSEPAPRA ELSIDAYHVE IDNRVGNTGN FSALDTNLPE DVRSLLLQTG
TTQAKFFYNA FSTRTKGIEF TGSYKILLNK GSLSFLAGAN FSKNEVSGVN TPKGLETYRY
VIFSEAERAR VTTNIPQQKV TLQGIYNSRK WNLLLRTVYF GTVTTATALN ATFPRPDYFF
QKLPAIWVTD LSVGYHITPQ LLATIGVNNA FDVLGDYTAP AVSGLRNPTV VGIQNGSAGV
QPFARLLAKF
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