Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3892 |
Symbol | |
ID | 5742290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4788544 |
End bp | 4789905 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641295006 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001560978 |
Protein GI | 160882010 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTT GGGTTTTTAA TCATAAGAAA ACTAAAGAAT CAAATGACTT ATCGGAGGAA GAATCAAACA ACTTATTGGA AGAAGGATCA AATGATTTAT TAGAAAAATC AAATGGCTTA TTAGAAGAAT CAAATAACTT CTTGGATGAA GAGCAAAATA ACTTATTGGA TGAAGAGCAA AATGACTTCT TGAATGAAGA ATCAAATGAC TTATTAGAGA AAGATATAAA TGACTTATCG GAAGAAGATT CAATTTATTT AAAATGGAAG AAAAAATACC GTCATTTTTT AGTAGGTTCC CTAGTAATTG TATGTATAGG AATCGTATCA TTTACCGTTG GAACACGGTC AGGACGAGAA ATTTTTTATA ATTTAGCAGG TTTATTTCTG CATGAGGCCA TGGACACTTC ACCAGAAGTT CTTCAACCAT TAGTAACGCC TTACCCAGAT GATGATGTGG ATTCCGAGGA TGTGGTTGAT CTCTTTTCAG AAACAGATAT CACAGAAGTA TCGGATAAAA ATATCATACC TAGAAGTGAG GAGGGTGTAG ATAATTTTCT GTTACTCGGA ATTGAAGAAA TTAATAACGC AAGAAATACA GATTCTATTA TGATTGTCTC CATTAATAAA AAAAGCAAGG AAATAACACT AGTATCAATA CTTCGTGATA CGTATATTGA ATATGAGAAT CGAGCTAGAA AATTAAATGC CTATTATGCA GCTGGAGGAA TGAGTACACT CATCAGTGTA ATTGAGGAAA ATTATCGTAT TAAAATAGAT GGTTATGCCT ATGTAAACTT TGAGGCATTT GAGAAAGTTG TTGATGAATT AGGTGGAGTT GATATAGAAC TAGGAGCGAA AGAAGCTGCT TACTTAAATG TAAAAAATTA TATTTCAAAT CCTACCTATC GGAATGTAAA AGCTGGAATG AATCATCTTA ACGGTAACCA AGCACTTGGC TATGCAAGGG TTAGAAAGGT TGAAACTTTA GGTGGAGTGA ATGACGATTA TGGAAGAACC TTAAGACAGC GTCGTTTACT AACTGCTATA TTTGATAAGT ATAAAAAGAA AAATATATTT GACCTATTAT CTATCACAAC AAAATGTCTA TCCTATGTAA AAACGAATGT TACTAGTGGG CAAATATCAG ATACAATAGA ATTTATTGTT GAGGATGGAA TAACAAGCTT AAGTTCAGAA CGTTTCCCTT ACGATGGATT GTTTGAGGAT CCTCATGAGT ATAATGGTAT TACTTATCCT ATTCTTCCTA ATTGGGAAGA AAATATAGTT CGCTTGTATC AAGATATATA CAAAGACACG GAAGAGGAAG CAAGAGCTGC GTATTTAGCT ACGGAGAATT AG
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Protein sequence | MKVWVFNHKK TKESNDLSEE ESNNLLEEGS NDLLEKSNGL LEESNNFLDE EQNNLLDEEQ NDFLNEESND LLEKDINDLS EEDSIYLKWK KKYRHFLVGS LVIVCIGIVS FTVGTRSGRE IFYNLAGLFL HEAMDTSPEV LQPLVTPYPD DDVDSEDVVD LFSETDITEV SDKNIIPRSE EGVDNFLLLG IEEINNARNT DSIMIVSINK KSKEITLVSI LRDTYIEYEN RARKLNAYYA AGGMSTLISV IEENYRIKID GYAYVNFEAF EKVVDELGGV DIELGAKEAA YLNVKNYISN PTYRNVKAGM NHLNGNQALG YARVRKVETL GGVNDDYGRT LRQRRLLTAI FDKYKKKNIF DLLSITTKCL SYVKTNVTSG QISDTIEFIV EDGITSLSSE RFPYDGLFED PHEYNGITYP ILPNWEENIV RLYQDIYKDT EEEARAAYLA TEN
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