| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3676 |
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| Symbol | |
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| ID | 5742700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4516190 |
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| End bp | 4517305 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641294786 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001560762 |
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| Protein GI | 160881794 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000048428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTATCAA ATGGAGAAAA GTTAAGAATC CGGCTCGTTC GAGAGAATTT AAAACGAGTA
GTAGTTTTTT CGTCCATTTT AGGTTTTTTA TTACCGATCT TGGCTTTATT TCTATGGAAT
TTCGGTGAGA ATAATGAAGT TCGAAAAGCA TACCTTGGAT TTTTATTAAC ATTTGAGGTA
ATAACTATAG CATTTCTTGT CTTAGGTTCT TATAGTAAGA GGAAGAAAGA TTATGTAATT
GCCCCTATTA TTTATCGAAG TTTTTGGAGT TTTTCCTTAT TATTTATTTA TGCTTCCAGT
TATATTTCCC TGTTTGAAAG TAACAATATA GGAATATATT GCGTTTTAAT TTCTGTTGCG
GCATTGGTGC CCCTTTTAAA TTTAAAGGAG TTTCTATATT TTGCAGCAAC ACAGATGATT
TTCTTTAGTT TTGTATTGTT TCAACTAGAG TTATCCTTTG CAAGTAAGTT GAGTATGATA
ATATACAGTG GTGCGCTACT TTGTATTTCT AGATTTTTAT ATTCACAATA TAGAAAAATG
CTAAAGATGC AGCAAAAACT TCAATCTATG GCAAAGAATG CGGAAGAAGA TCCACTTACT
GGTTTATTAA ATCGCAGGGG CTTAGATCGT AATCTGGAAG TCTTATTGCC TTATTGTATT
CGGAGCGGCA TCAGAATTGG ACTTATGATT GTGGATGTGG ATAATTTTAA GCGCTATAAC
GATAGTTTTG GACATCCACA AGGGGATAAA TGTTTGAAAA TGGTTGCTGC AGAGATTAGA
AAAACTGCAA GAAGGAGTAG TGATCTCACT GCTCGAATCG GTGGAGAAGA GTTTGTCATT
CTCGTATATG ATGAGAAGGA ATCGGAATTA ATTTCTTTTG CAGAAAAAAT ACGAACAAAT
ATAGAAAATC TTAATATTAA ACATAGCCCG ACGCTTGGAG CAGCAGTTGT TACGGTAAGT
ATTGGTGTAT CCTCTGTAGT TCCTACCACC ATGCAGTGTA TGTCGGAATT ATATAAGTCA
GCGGATCAAT CATTATATAC CGCAAAAAAA AGTGGCAGAG ATGTAGTGGT ATATAAAGAA
AAGGTATGTG GAAAAAGAAA TCGAATGGCA GAATAG
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| Protein sequence | MLSNGEKLRI RLVRENLKRV VVFSSILGFL LPILALFLWN FGENNEVRKA YLGFLLTFEV
ITIAFLVLGS YSKRKKDYVI APIIYRSFWS FSLLFIYASS YISLFESNNI GIYCVLISVA
ALVPLLNLKE FLYFAATQMI FFSFVLFQLE LSFASKLSMI IYSGALLCIS RFLYSQYRKM
LKMQQKLQSM AKNAEEDPLT GLLNRRGLDR NLEVLLPYCI RSGIRIGLMI VDVDNFKRYN
DSFGHPQGDK CLKMVAAEIR KTARRSSDLT ARIGGEEFVI LVYDEKESEL ISFAEKIRTN
IENLNIKHSP TLGAAVVTVS IGVSSVVPTT MQCMSELYKS ADQSLYTAKK SGRDVVVYKE
KVCGKRNRMA E
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