Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3528 |
Symbol | |
ID | 5743640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4358111 |
End bp | 4358503 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641294639 |
Product | response regulator receiver protein |
Protein accession | YP_001560616 |
Protein GI | 160881648 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000178866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGATAC TAATAGCGGA AGATGATTTT GCAAGTAGAA AGTTTATGCT TCGATTTTTA TCGCAATACG GGGAATGTGA TATTACCGTA GATGGGATGG AAGCAGTAGA TGCCTTTACG ATGGCGCTTG AATCAAATGA ACCATACGAT TTAGTTTGCC TTGATATTAT GATGCCAGCA TTGGATGGTT ATCAAGCATT AAAGGGAATC CGTGATTTAG AAAAGGAAAA GGGAATTCCT GAAGAAAAAC AGGCAAAGAT TATTATGACT ACAGCTCTAA GTGAAGGAAG AAATGTTACT AAAGCCTTCG AACTTGGTTG TGTTGCTTAT GCAGGTAAAC CAATCGACCA AACAAAGTTT GAGAATGTAT TAAAGAAATT AGAATTACTG TAA
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Protein sequence | MKILIAEDDF ASRKFMLRFL SQYGECDITV DGMEAVDAFT MALESNEPYD LVCLDIMMPA LDGYQALKGI RDLEKEKGIP EEKQAKIIMT TALSEGRNVT KAFELGCVAY AGKPIDQTKF ENVLKKLELL
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