Gene Cphy_1908 details

Gene Information

• Locus tag: Cphy_1908
• ID: 5744587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 2351801
• End bp: 2353729
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641293005
• Product: membrane protein-like protein
• Protein accession: YP_001559016
• Protein GI: 160880048
• COG category: [S] Function unknown
• COG ID: [COG1511] Predicted membrane protein
• TIGRFAM ID: [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0193377
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGTT TTTTAAATAA AGCAACTGTT TGTGTACTCT GTACTGCCAT GGTTGGAGGT 
ATCTGCTATG TAGGTACTAC TTTTTCTAAA AATGAGGGAA CCGCTTATGC TGCTACACAG 
ACACATCTAA ATGTTAATAC ATTAGGTAAA CTAGACAATT CTACATTTAC TACTAACTTA 
AATGATAAGA AAGAAAATAA GAAAGCAGAA AAAGAAGAAG TCGTATATGT TAAAATGAAT 
TCAAGCGCTG AGGTATCACA AGTAATTGTA AGTGATTGGT TAAAAAATTT TAATACCGAT 
TCCACAATAC TAGATCAATC TGATCTTGAG AATATTACAA ATATCAAAGG TGATGAACCA 
TTTGTAACCA ATGCAGATGG AACGATATCT TGGGAAGCAA ACGGTAATGA TATATATTAC 
CAAGGAACCA CAACAAAGGA ATTGCCTTTC GATGTAAAAC TAACTTATCT TCTTGATGGA 
GAAGAAGTTA ACGCGAATGA CATTGTGGGA AAATCCGGTG CATTAACTAT AAAACTTCAG 
TTTAAGAGCA AGGAACAAGT GCCATTTTCT ATTCTTTCTG TAACAACTGC AAGCACTGAT 
TTGTTTAAAA ACGTGACTGC AAAGAATGCT AAAGTAATAT CTGATGGCGA TAAATATATC 
ATTGTTGGTG TAGCAATGAG TGGTGTACAA GAGACTCTCA ATTTAGAAAG CATTGAAATT 
CCAGAAGAAA TCGAAATTAA CTGCGATGTT ATAGATTATG ATCCAATTAT GTTTCTTAAT 
GTAGTAACTA CCGGATTATT ATCTGATATC AAATTAGATA ATGACCTTGA TTTAAAGAAA 
CTATCCGACT CTATGGATAC CCTATATCAG TCTTGTGAGG AATTAAGAGA TGGATCAGCA 
ACTCTTTCAA GTTCTCTATC CGAATTTCAA GGAAAGTCAG AGGAGTACTT CTCTGGGGTA 
ACAACTTTAC TTAATGGAAC AAAGGAATAT ACCGATGGCG TAGCAAAAGT TATCAGTGGT 
GTGAAAGAAC TACATTCCAA ATCTAACACT CTTATAGAAG GTATTAGTGC CTTATTAGAA 
GGTTCTAACT CCTTAGATGC AGGGATAAAT CAAGCAAACA CTGGGATAAC CACCTTAAAC 
AAACAGTTTA AAAATTTAGT TGCGGGTAGT AAATCCTTAA AAGAAAATCT TGCTTCCTTA 
CAGCAATTAG TCTCCGGTAT TGCGGATGGG AAAGCAAAAG AAAACGAAGT ATTTTCACAG 
TTACTACAAA CTGTCGAAAA TAATGAAAAG ATTCTTGCAA CCTTAAAAGC AGCAAATGCT 
GATGCTAATA TTATCGCAGC TTTAGAAAAA AATACAGCAG CACAACGTCA AATTGCAGAG 
GGCTTAATAA CAAGTGGCAA AACATTAAGT GCTTATCTTG ATAAATTAAA CGGTGCTGTC 
ACTCAAATTT CTCAGGGTGC AGAAACTTTA TATCAGGGTT GTACTTCCAC AGACAATGCA 
CAGGAACAAT TGAAAACTGG ACTATCAAAA CTTACAGCAG GTAGCAAAGC ATTAGAAGCT 
GGTCTAACCT CTTTAAATAG TGGTTCCAAA GCATTAAAAA CAGGAATTGA CCAATTGTAT 
ACAGGAGTAA CACAGCTAGA AAGTGCAACA TCTTCCTTAA CAAATGGTTC TGCAAAATTA 
AAGGATTCCA CATCATTAAT GACAAATGCA GTTGGTGAGC TTACTATTGG TGGAAAGAAA 
ATATCCGATG GAATGAACAA GTTCTATGAA GAAGGAATAA AAGAAATTTA TAATAAATAT 
AATGATACGG TATCTGTATT ACAGGGAAAA TTAGATACTT TAATCGAACA AGGTGAGAAC 
TATAAATCCT TTACTAACCT AACAGATAAT ATGGATGGTA ACGTAAAGTT TATAGTAGAA 
ATTCAATAA 

 

Protein sequence

MKRFLNKATV CVLCTAMVGG ICYVGTTFSK NEGTAYAATQ THLNVNTLGK LDNSTFTTNL 
NDKKENKKAE KEEVVYVKMN SSAEVSQVIV SDWLKNFNTD STILDQSDLE NITNIKGDEP 
FVTNADGTIS WEANGNDIYY QGTTTKELPF DVKLTYLLDG EEVNANDIVG KSGALTIKLQ 
FKSKEQVPFS ILSVTTASTD LFKNVTAKNA KVISDGDKYI IVGVAMSGVQ ETLNLESIEI 
PEEIEINCDV IDYDPIMFLN VVTTGLLSDI KLDNDLDLKK LSDSMDTLYQ SCEELRDGSA 
TLSSSLSEFQ GKSEEYFSGV TTLLNGTKEY TDGVAKVISG VKELHSKSNT LIEGISALLE 
GSNSLDAGIN QANTGITTLN KQFKNLVAGS KSLKENLASL QQLVSGIADG KAKENEVFSQ 
LLQTVENNEK ILATLKAANA DANIIAALEK NTAAQRQIAE GLITSGKTLS AYLDKLNGAV 
TQISQGAETL YQGCTSTDNA QEQLKTGLSK LTAGSKALEA GLTSLNSGSK ALKTGIDQLY 
TGVTQLESAT SSLTNGSAKL KDSTSLMTNA VGELTIGGKK ISDGMNKFYE EGIKEIYNKY 
NDTVSVLQGK LDTLIEQGEN YKSFTNLTDN MDGNVKFIVE IQ