Gene Cphy_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1762 
Symbol 
ID5741436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp2168688 
End bp2169272 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content39% 
IMG OID641292862 
ProductTetR family transcriptional regulator 
Protein accessionYP_001558873 
Protein GI160879905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACCCC AAAAAAAGAT AAGTAAAGAG GATATTGAAG AAGCTGCTTT TCTAATTGCT 
AAAGAAGAAG GATTTTCGGG AATTACCGCG CGAAATGTGG CGAAACACCT TGGGTGTTCG 
GTTGCTCCAA TTTATGTAAA TTTTACAACG ATTGATGTTC TGATTGAAGC TGTTATAGTA 
CGTGTTTTTG CCATTTCCGA TGAGCTGCTG GCGAAACAAA AGGGACAATA TGCATTTGAA 
AATGTTGGGA AAGCCAGTTT AGCGTTTGCA CGAGAATATC CGGTTTTTTT TCGTGAACTG 
ATAATGCAAC CAAATCCATA TATGGATTCG TATGATGCAG TTGAAAAAAA AATACTTGAA 
CAATTGGCTG AGGCTGAGTC GATGAGTGGT TGGACTCTTG AAGAAAGAAG GAATCTGTTG 
TTAAGAATGA GGATCTTTCA AACTGGCTTG TCGGTTATGA TAGCTAACGG ACATATTCCA 
TCTTGGCTGG ATGACAAAGC AGTGGAAGCG GTGCTGTTTG AAACAGGAAG GGATCTTTTA 
TGTATTCAAA AAATGAAACG GGAGGGGAAT ATAAAAAATG AATAA
 
Protein sequence
MPPQKKISKE DIEEAAFLIA KEEGFSGITA RNVAKHLGCS VAPIYVNFTT IDVLIEAVIV 
RVFAISDELL AKQKGQYAFE NVGKASLAFA REYPVFFREL IMQPNPYMDS YDAVEKKILE 
QLAEAESMSG WTLEERRNLL LRMRIFQTGL SVMIANGHIP SWLDDKAVEA VLFETGRDLL 
CIQKMKREGN IKNE