| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1652 |
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| Symbol | |
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| ID | 5744473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2033850 |
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| End bp | 2035121 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292752 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001558763 |
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| Protein GI | 160879795 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0437623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATTC ATGTAGTAAA GCCAGGTGAT AGCGTATTAT CTATCGCAAA TCAATATGGA
GTATCCGTAC AGCGTCTCAT TTTTGATAAC GAGATTTATA CACCCGAGAA TTTGGTGGTT
GGTCAAGCAC TATTAATTCT GCATCCAACC AAGATATATC AGGTTAAACC TGGAGACACG
CTCTATTCCA TAGCTCAGGA TTTTCAAGTT AGTGTCATTA GCTTGATTCG TAACAATCCG
TATATCATAC AGGAACGACA ATTAAGTGAA GGTCAGGTTC TAGTCATTAC TTATGAAGGG
GTTAGAGATA AGATTATATC CACCAATGGT TATGTTTATC CTTATGTAAA TCGTCAAGTA
TTAGAACAAA CACTTCCGTA TCTTACAAAT CTAAGTATCT TTTCATATGG ATTTACAACA
GAAGGTGAAT TAATACCAAT AGATGACGAT GAGGTACTGG AAATTACAAC AAAGCATGGG
GTAGGACCTG TATTAACGCT CACACCTTTA GATGAAAATG GAATGTTTAA CAATGCGTTA
GTAAGCGCTG TTGCACAAAA TGTGGAGGTT CGGGACCATT TAATTGATGA ACTGTTAGCT
GTGGTAAAAG AAAAACAGTA TGTTGGTGTT AATGTCGATT TTGAGTACAT CAAAGCAGAA
GACCGGATTG GCTTTGCAGA ATTTGTTGCA GAATTAACAA GAAGAATGAA TGAAGAGGAC
TTCTTTGTTT CAGTAGCATT GGCTCCTAAG ACAAGTGAAA ATCAGCCTGG TTTATTATAT
GAAGGTATGG ATTATCGCTT GCTTGGTGAG GCAGCGAATA GTGTTCTTTT AATGACGTAC
GAATGGGGCT ATACTTACAG TGAACCAATG GCTGTGGCAC CAATCAATAA GGTAAGAGAG
GTACTTGATT TTGCAGTAAC TCAAATACCA GTTGATAGGA TTGATATGGG TATTCCAAAC
TATGGTTATG ACTGGGCTCT TCCTTATGTC AAAGGAGAGA CAAGAGCACG AGCTATTGGT
AATATTGAAG CAGTTCAAAT CGCTGCTGCA AATAATGCGG TTATCCAATT TGATGAAGTA
GCGCAAACCC CATTTTTCAC CTATACTCGT GAGGGAGTAG ATCATGAGGT TTGGTTTGAA
GATGTAAGAA GTATCAAGGC AAAATTGGAT CTCGTGAAAG AATATGATTT CCGAGGTGTT
GGTTACTGGC AATTAATGAG ATTATTCCGC CCAAATTGGT TATTGTTAAA TTCAATGTTT
GAAATATTAT AA
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| Protein sequence | MEIHVVKPGD SVLSIANQYG VSVQRLIFDN EIYTPENLVV GQALLILHPT KIYQVKPGDT
LYSIAQDFQV SVISLIRNNP YIIQERQLSE GQVLVITYEG VRDKIISTNG YVYPYVNRQV
LEQTLPYLTN LSIFSYGFTT EGELIPIDDD EVLEITTKHG VGPVLTLTPL DENGMFNNAL
VSAVAQNVEV RDHLIDELLA VVKEKQYVGV NVDFEYIKAE DRIGFAEFVA ELTRRMNEED
FFVSVALAPK TSENQPGLLY EGMDYRLLGE AANSVLLMTY EWGYTYSEPM AVAPINKVRE
VLDFAVTQIP VDRIDMGIPN YGYDWALPYV KGETRARAIG NIEAVQIAAA NNAVIQFDEV
AQTPFFTYTR EGVDHEVWFE DVRSIKAKLD LVKEYDFRGV GYWQLMRLFR PNWLLLNSMF
EIL
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