Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1251 |
Symbol | |
ID | 5744857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 1580100 |
End bp | 1580870 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641292357 |
Product | Cof-like hydrolase |
Protein accession | YP_001558368 |
Protein GI | 160879400 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000202118 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA TAATTGCTAG CGATATGGAC GGGACACTAC TACTAAACGG ATGCCAGCAA GTTAGTGACC GTGCTATCTC TATTATAAAA CAGCTACATG ATAAAGATAT TCTCTTTGTT GCAGCCAGTG GCCGTCAATA TCCAAATCTA TACCGTAATT TTAAAGATGT TGCCAAACAT ATGGCATTTA TATGTGAAAA TGGTTCCCTT GTCATGTATC AAGATAAGGT TTTGTATAAA AGTGTTATGG AGCCAAAATT GGCGAAAGAA CTATTTCAAA CTATATATGA ACGAGAAGGT TGCGAAGTTC TTGCCTCCGG CCAAAATACT TCCTACTTAC TCCCAAAAAC TGATAGCTAT GTTCATCGTA TGAAAAATAT CGTAAAGAAC AACGTAGTAG TAATCAATAG TTTTGAAGAA ATACCAGAAG ATATCATAAA AATTTCAGTA TATGAAGTAG ATGGTATTTC TCATTCTGCT TCCTATTTTA CCTCACTTTT TGGTAATAAG TTAAAAGCGA CCATATCAGG TGAACAATGG CTAGACTTCG TTAACCCTTT CGTAAATAAA GGAGCGGCTC TAAGCCATTT ATTAGATTAT CTATCCCTTA GCCCAGATGA AGCAATGGCC TTCGGTGATA ACTATAATGA CCTAGAGATG CTCTCTTTAG TCTCCTATGG TTATGTAATG GATAATGCAG TACCTGATAT CAAAAATCGA TATTCTTATA AAACATCCTT AGTAGAAGAT ACCTTAGAGA AGTTATTATG A
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Protein sequence | MIKIIASDMD GTLLLNGCQQ VSDRAISIIK QLHDKDILFV AASGRQYPNL YRNFKDVAKH MAFICENGSL VMYQDKVLYK SVMEPKLAKE LFQTIYEREG CEVLASGQNT SYLLPKTDSY VHRMKNIVKN NVVVINSFEE IPEDIIKISV YEVDGISHSA SYFTSLFGNK LKATISGEQW LDFVNPFVNK GAALSHLLDY LSLSPDEAMA FGDNYNDLEM LSLVSYGYVM DNAVPDIKNR YSYKTSLVED TLEKLL
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