Gene Cphy_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1251 
Symbol 
ID5744857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1580100 
End bp1580870 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content35% 
IMG OID641292357 
ProductCof-like hydrolase 
Protein accessionYP_001558368 
Protein GI160879400 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000202118 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA TAATTGCTAG CGATATGGAC GGGACACTAC TACTAAACGG ATGCCAGCAA 
GTTAGTGACC GTGCTATCTC TATTATAAAA CAGCTACATG ATAAAGATAT TCTCTTTGTT
GCAGCCAGTG GCCGTCAATA TCCAAATCTA TACCGTAATT TTAAAGATGT TGCCAAACAT
ATGGCATTTA TATGTGAAAA TGGTTCCCTT GTCATGTATC AAGATAAGGT TTTGTATAAA
AGTGTTATGG AGCCAAAATT GGCGAAAGAA CTATTTCAAA CTATATATGA ACGAGAAGGT
TGCGAAGTTC TTGCCTCCGG CCAAAATACT TCCTACTTAC TCCCAAAAAC TGATAGCTAT
GTTCATCGTA TGAAAAATAT CGTAAAGAAC AACGTAGTAG TAATCAATAG TTTTGAAGAA
ATACCAGAAG ATATCATAAA AATTTCAGTA TATGAAGTAG ATGGTATTTC TCATTCTGCT
TCCTATTTTA CCTCACTTTT TGGTAATAAG TTAAAAGCGA CCATATCAGG TGAACAATGG
CTAGACTTCG TTAACCCTTT CGTAAATAAA GGAGCGGCTC TAAGCCATTT ATTAGATTAT
CTATCCCTTA GCCCAGATGA AGCAATGGCC TTCGGTGATA ACTATAATGA CCTAGAGATG
CTCTCTTTAG TCTCCTATGG TTATGTAATG GATAATGCAG TACCTGATAT CAAAAATCGA
TATTCTTATA AAACATCCTT AGTAGAAGAT ACCTTAGAGA AGTTATTATG A
 
Protein sequence
MIKIIASDMD GTLLLNGCQQ VSDRAISIIK QLHDKDILFV AASGRQYPNL YRNFKDVAKH 
MAFICENGSL VMYQDKVLYK SVMEPKLAKE LFQTIYEREG CEVLASGQNT SYLLPKTDSY
VHRMKNIVKN NVVVINSFEE IPEDIIKISV YEVDGISHSA SYFTSLFGNK LKATISGEQW
LDFVNPFVNK GAALSHLLDY LSLSPDEAMA FGDNYNDLEM LSLVSYGYVM DNAVPDIKNR
YSYKTSLVED TLEKLL