Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1140 |
Symbol | |
ID | 5741975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1437798 |
End bp | 1438955 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641292245 |
Product | GDSL family lipase |
Protein accession | YP_001558257 |
Protein GI | 160879289 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00178726 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATATA ATGGTGAAAT TACTAGTAAG GTAAGGAGAG GTACGATGGG GGAAATGAGA AAGGTTCCAT TAGAGCAAGT GGAACACTAT AAGGTACATG GAAGAACAAC CAAAGAAAGA AATCCGCTAA CATTATTTTG GACTGGTAGT GGAATTGAGG TAAATGTATC TGGTACAGAA ATTTGGGTCG AGCTCTACTC AGATTACGAC TGTTTTGAAC CTTGGATTAG TGTTTTAGTA AATGGAGAAG TCATAAGTAG ACAGATGGTG TTAAAAGGGA TGCATAAATT ATGTCTATTT CGAAACATGA ATCCTGACGT TATAAAAAAT ATTCAGATTT TTAAGGAAGT TCAGGCTATG CCTGATGATG AAAAGCATTG TCTCCAGGTT TTCTCTTTTG AGTTAGATGG AGAGTTTTAT AAAGTACCAG AACGTAAAGC AAAGCTCGAA GTAATCGGGG ATAGTATTAC ATCAGGGGAA GGGGCTATTG GCGCAACATG TGAAGAGGAC TGGATTTCTA TGTGGTTTAG TTCTCAAGAT AATTATGCAA CCCTGTTAGC TAAAAAACTA GGTGCAGATC TTCGAATTAT ATCTCAAAGT GGTTGGGGTG TAGTCTCTAG TTGGAATAAT AACCCTTATG GAGCAATACC ACCAATCTAT GAAGAAGTTT GTGGACCTCT AAAGGGTGAG AGAAATGAAG CACTTGGAGC GCATGAAAAG AATGATTTTA AAGCTTGGCA GCCAGATGTA ATTGTAATTA ATCTTGGTAC GAACGATGGT GGCGCATTTG ATCAGCCAGA ATGGCAAGAC GAACGAACAG GAGAAACATT TAAGGAGCGA AAGAACGAGG ATGGCACCTA TTATGAAGAA GATTTAGATC GTTTTGAATG GGCAGTTCGA GCGTTTTTAA GAAAACTACG AAGATTAAAT CAAAATGCGT ACTTACTCTG GGTTTATGGA ATTCTTGATA AACCTCTTCT ACCTACCTTG CAAAAAGCAA TCAATACATA TCAAACAGAA TGTGAAGATT TAAAGGTATC TTTACTTGAG ATTCCCAAGA TGACAGAGGA GGAGATTGGA GCAAGGTATC ATCCAGGGAA AAAAGCGCAC GAACGTATGG CTACTATCTT AAGTGAAGAA ATTCAAAATA TATTATAG
|
Protein sequence | MEYNGEITSK VRRGTMGEMR KVPLEQVEHY KVHGRTTKER NPLTLFWTGS GIEVNVSGTE IWVELYSDYD CFEPWISVLV NGEVISRQMV LKGMHKLCLF RNMNPDVIKN IQIFKEVQAM PDDEKHCLQV FSFELDGEFY KVPERKAKLE VIGDSITSGE GAIGATCEED WISMWFSSQD NYATLLAKKL GADLRIISQS GWGVVSSWNN NPYGAIPPIY EEVCGPLKGE RNEALGAHEK NDFKAWQPDV IVINLGTNDG GAFDQPEWQD ERTGETFKER KNEDGTYYEE DLDRFEWAVR AFLRKLRRLN QNAYLLWVYG ILDKPLLPTL QKAINTYQTE CEDLKVSLLE IPKMTEEEIG ARYHPGKKAH ERMATILSEE IQNIL
|
| |