Gene Cphy_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1040 
Symbol 
ID5741876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1313619 
End bp1314086 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content36% 
IMG OID641292147 
Productprotein tyrosine phosphatase 
Protein accessionYP_001558159 
Protein GI160879191 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAA TTATGTTTGT TTGCCTCGGA AATATATGCC GCTCTCCAAT GGCGGAATTT 
GTATTTCGAG ATATGATAAA GAAAAAAGGT CTGGAATCTG TGATCTGCTG TGAATCAAGT
GCAACGAGTA CAGAAGAAAT CGGTAATTCG GTTCACTACG GGACTAAGAA AAAACTAAAA
GAAGTTGGCA TCATTGTGGA TGGAAAAAAA GCAGTCCAAC TAAAGCGTAG TGATTATGAT
AAATATGATT TGCTTTTAGG GATGGAACAA CGAAACATAA CTAATATGAT GAGAATTCTA
GGGAGTGATC CGAATGGTAA GGTTAAGAGA CTTCTTGATT TTTCAGAATG TCCAAGAGAT
ATTGCAGATC CATGGTATAC GGGAGATTTT GAAACAACTT ATCAAGATGT TTATGAGGGC
TGTGACCATC TAATAACCTA CCTCATCAAT AATTATGAGT TATACTAA
 
Protein sequence
MIRIMFVCLG NICRSPMAEF VFRDMIKKKG LESVICCESS ATSTEEIGNS VHYGTKKKLK 
EVGIIVDGKK AVQLKRSDYD KYDLLLGMEQ RNITNMMRIL GSDPNGKVKR LLDFSECPRD
IADPWYTGDF ETTYQDVYEG CDHLITYLIN NYELY