Gene Cphy_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1037 
Symbol 
ID5741873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1310081 
End bp1311613 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content36% 
IMG OID641292144 
ProductABC transporter related 
Protein accessionYP_001558156 
Protein GI160879188 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TAGAAATTAA CAACGTATCG CATGCTTATG GAGAAAAAAC ACTGTATAAA 
CAGGTATCTC TAGAATTCTA TCAAGGGGAG CATATTGGAA TCGTGGGCTC TAATGGTGCG
GGTAAAAGCA CTTTAATACA AATGATGATT GGGGAGGTGA TTCCAGATCA GGGATATATA
AGATGGCAAA ATGGGATTCG TACTGGATAT CTGGATCAAT ATGCAAAGAT GGAGGATGAT
ATTAGTATCA TTCAGTATCT AAAGACTGCA TTCTCAGAAT TATATCAGGT AGAAACTGAG
TTAACCAATC TTTATGAAAA GTTGTCTGAG GCAGAAGATG TGGAACTGTA CTATAATAAA
ATTAACGCGT ATCAACAAAA ATTAGAAGAC GAAGATTTCT ATCAGATTGA TAGTAGAATT
TCAAAAATTG TTACCGGACT TGGGATTGAT GCATTTAATA TTAATTCCTT GCTTGGAAAG
CTAAGCGGCG GACAACGGGC GAAAGTGATT CTGGCAAAAT TATTATTAAA TGAAACGGAT
GTATTAATTT TGGATGAACC AACGAACTTC TTGGATAAGG AGCATGTTGT ATGGTTGGCG
GAATATTTAA AAAATTACAA AGGCTCTTAT TTTGTCGTAT CTCATAATTA TGAGTTTCTT
GAACAGTCAG GTTCTGATAT CTGTGATATC GAGTTTGGGA CAATGAAAAA ATACGGTGTG
AGGTACTCAG AATTTCTTAA ATTAAAAGAA AAGCAAAAAG AAGATTATAT AAAAAGATAC
ACCCTGCAAC AAGAGGAAAT AAAGAGAACA GAAGAATTTA TACGTAAAAA TATCGCGGGT
ATTAAGACGA AGATGGCACA AGGAAGAAGA ACACGTCTGG AGAGGATGGA GCGCTTAGAG
AAACCAAATT TTCAGCAAAA AGTACATCTG AATTTCTTAT GGGTATCTCC GGCTGCCTCC
CCGGCACTAG TGATAAAGAA CTTAGAAGTC GGTTATGATA AAGTCTTATT ACCGTCAATT
AACCTTACAA TGATGAGTTC TGAAAAAATA GCAATTACCG GATTTAACGG AATTGGCAAA
TCAACTCTTT TAAAAACTCT GGTAGGGTAT ATTAATTCGT TAGGAGGGGC GTATCGTTTT
TCGGATACCG TAACACTTGG ATATTTTGAA CAGGAGTTAA GCTGGGAGGA TTCCTCGAAA
ACCCCGTTTC AGATAGTTAT GGATTATGAC CCAGCCATGA AAAGGGAACA GATCAGAAGA
AAGCTATCTG AAGTTGGAAT TAAGTCAGAG CATATTGAGA AGGAGATCAG ACTGTTAAGT
GGTGGCGAAC AGGCTAAAGT AAAGCTATGT TTATTATTAT TAAAACCATG TAATTTTTTG
ATTCTTGATG AGCCTACGAA TCATCTAGAC CAAGAAGCAA AAGAGGGATT AAAAAGCGCT
TTGGAGGAAT TTTCGGGAAA TATCATATTG GTGTCTCATG AGGAGAAATT CTATAGCGGA
TTAGTAGACC GTGTAATTAA AATCACGAAA TAA
 
Protein sequence
MSLLEINNVS HAYGEKTLYK QVSLEFYQGE HIGIVGSNGA GKSTLIQMMI GEVIPDQGYI 
RWQNGIRTGY LDQYAKMEDD ISIIQYLKTA FSELYQVETE LTNLYEKLSE AEDVELYYNK
INAYQQKLED EDFYQIDSRI SKIVTGLGID AFNINSLLGK LSGGQRAKVI LAKLLLNETD
VLILDEPTNF LDKEHVVWLA EYLKNYKGSY FVVSHNYEFL EQSGSDICDI EFGTMKKYGV
RYSEFLKLKE KQKEDYIKRY TLQQEEIKRT EEFIRKNIAG IKTKMAQGRR TRLERMERLE
KPNFQQKVHL NFLWVSPAAS PALVIKNLEV GYDKVLLPSI NLTMMSSEKI AITGFNGIGK
STLLKTLVGY INSLGGAYRF SDTVTLGYFE QELSWEDSSK TPFQIVMDYD PAMKREQIRR
KLSEVGIKSE HIEKEIRLLS GGEQAKVKLC LLLLKPCNFL ILDEPTNHLD QEAKEGLKSA
LEEFSGNIIL VSHEEKFYSG LVDRVIKITK