| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0789 |
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| Symbol | |
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| ID | 5745269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1015630 |
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| End bp | 1016487 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641291903 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001557915 |
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| Protein GI | 160878947 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAG TGTTTTTAAG TGATATGCTA TTGCCTGTCA CACCATCAAA ATTTGTTACA
AAAATTAAGA ATCAAAATAA AAGCATTCAA TTATTGAATG AAGAAGAAAT AAATCTTATA
AAACCAGCCG GTCTATCGGA ATTTAGCTTC TCTTTTCTTC TACCAAATGT AAGATATCCT
TTTGCTTTGT ATGATTCCGA ATTTCATATG GCCAATTGGT ATACAGAGAA GTTAAAAATC
CTTAAAAACG GTAAATTTGC CTTTCCTTTT ATCGTATCGA GAATGTCAAG TAAGGGCGTG
TGGATGTTTC ATACCGATAC TATTGTTACA TTAGAAGATT ATAGCATCAC AGAAGATTGC
GATAATGGGG TAGATCTGAT AGTAGATGTT ACTTTAAAAA ACTACCAGCC TTATGGTGTG
GTCATTGTTC CCTTAAAAAA TAAAGGGGAA GCAGTGAAGA AAAATGTACG TATGAAAAGC
AAAACAATGC CATCAACATA CACAGTTAAG CCTGGAGACA CGTTATGGAA AATAGCAAAG
GAATTATTAG GGGATGGTTC AAAATGCTAT AATCTTGCGA AATTAAATAA CATAAGTAAT
CCGAATCTTA TCCGAGTTGG GCAGGTGCTA CGAATCGAAA ATGTGAGTAC TTCCACGCAA
AGTGCAACAC GGAATGTATC CTTAGCAAAT AAAAGTACTA GTTATAACTC TGCATTATAT
AATGATGTGA CTTTGTTAAC TCGTCTTATA GGGTACAATA ATGTACCGAT TCCTGAAGCA
AATGAGAAAG GACTGATGAA AGTTTCATCA ATCAAAAAGC CTGCTATCAT CACAAGACCC
AATAGCTGTG TAAGATAA
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| Protein sequence | MYKVFLSDML LPVTPSKFVT KIKNQNKSIQ LLNEEEINLI KPAGLSEFSF SFLLPNVRYP
FALYDSEFHM ANWYTEKLKI LKNGKFAFPF IVSRMSSKGV WMFHTDTIVT LEDYSITEDC
DNGVDLIVDV TLKNYQPYGV VIVPLKNKGE AVKKNVRMKS KTMPSTYTVK PGDTLWKIAK
ELLGDGSKCY NLAKLNNISN PNLIRVGQVL RIENVSTSTQ SATRNVSLAN KSTSYNSALY
NDVTLLTRLI GYNNVPIPEA NEKGLMKVSS IKKPAIITRP NSCVR
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