| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0573 |
|---|
| Symbol | |
|---|
| ID | 5743487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 737574 |
|---|
| End bp | 738956 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641291685 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001557699 |
|---|
| Protein GI | 160878731 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAGGTAGTAT TTTATTAGTA CTTACATTAA TGATTAGTTT ACTCGCTGGT
TGTGGTAAAA AAGACACAAC AGGTGAAGGC ACAGCTCCTA CCGCAGTGCC TACGAATGAG
GCTTCGAAAG AGAACCCAAC AGAGAAACCA AAGCAAGATG TTACAATTAA AGTAGCAGCA
ATCGAGACAG CTTATGGTCC TGACATGTGG ACAAAAGTTT GTGAAGCATT TGAAGCAAAG
ACAGGAATTA AAGTTGAACT TACAACTGAC AAGTTGTTAG AGGATGTGAT TGGTGCAGGA
ATGAAGGCTG GTGATTATCC AGATGTTGTT CATTTAGCAA CAGGACGTCC AGCAGCTTTA
ACAGAGACTT TAATAAAAGA GAATGGCTTA GAAGATCTTA CTGATGTTTT AAGCATGACA
GTTCCAGGAG AAGATAAGAA GGTTAGTGAT AAAATTGCTG GAGGATTTAC AGAATCTTCT
TTAACAAACC CTTATAACGA TGGAAAAACA TACATGGCAC CAATGTTCTA TAGCCCATGT
GGCTTATTTT ACAACAAAGG CTTATTCGCA GAAAAAGGAT GGACAGTTCC AACAACTTGG
GATGAGATGT GGACATTAGC AGATAAAGCA AAAGCAGAAG GTATCGCATT ATTTGCTTAT
CCAACCGCAG GTTATTTCGA TGCATTCTTC TATGCACTTC TTTATGAAGT AGGCGGTGCA
GATTTCTTCG CAAAAGCAAC CACATACACA GAAGGTATTT GGGATACTCC AGAGGCAAAC
AAGGCATTTG ACATTGTTGA GAAATTAGCA TCTTATACCG AAAAATCAGT TCCATCTAAC
GCAAACAATG ATAATTACCT TAAGAATCAG CAGTTAATCT TAGACAATAA GGCACTATTT
ATGCCAAATG GTACTTGGGT TGTTGGTGAA ATGAAGTATG CTCCTCGTGT AAATGGATTT
GAGTGGGGAT TCACAGCTCT TCCAGCAATC GCTAAGGGTG AAGATTCTTA TTCCTTCACA
TGGTTTGAGC AGTTATGGGT TCCGGCAGCT GCGGAGCATA AAGACGCAGC AAAGCAATTT
GTAGCATTTA TGTATTCTGA TGAAGCAGCT AAGATTTTTG CAGAGTCCGG TGCTGTTCAG
CCAATCGTTG GTTTTGCTGA CAAATTAGAA GGTGACAACA AGTTGTTCTA CAGTATCTAC
GATAATGGGG CAAAGGCTGC TTTAGGTGGA TTTGCAGCGA CAGAACCAGT AGAAGGTGTA
AATTTTAGTG ATACCGTATT TGGAACAGTA AACTCCTTAG TAAGTGGAGA TAAAACAAAA
GCTCAGTGGA TTGATTTAAT TAAAAAGGAT AGTGACTTGC TCCGTGCTGC ATTAAAAAAA
TAA
|
|---|
| Protein sequence | MKKIGSILLV LTLMISLLAG CGKKDTTGEG TAPTAVPTNE ASKENPTEKP KQDVTIKVAA
IETAYGPDMW TKVCEAFEAK TGIKVELTTD KLLEDVIGAG MKAGDYPDVV HLATGRPAAL
TETLIKENGL EDLTDVLSMT VPGEDKKVSD KIAGGFTESS LTNPYNDGKT YMAPMFYSPC
GLFYNKGLFA EKGWTVPTTW DEMWTLADKA KAEGIALFAY PTAGYFDAFF YALLYEVGGA
DFFAKATTYT EGIWDTPEAN KAFDIVEKLA SYTEKSVPSN ANNDNYLKNQ QLILDNKALF
MPNGTWVVGE MKYAPRVNGF EWGFTALPAI AKGEDSYSFT WFEQLWVPAA AEHKDAAKQF
VAFMYSDEAA KIFAESGAVQ PIVGFADKLE GDNKLFYSIY DNGAKAALGG FAATEPVEGV
NFSDTVFGTV NSLVSGDKTK AQWIDLIKKD SDLLRAALKK
|
|---|
| |