| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0530 |
|---|
| Symbol | |
|---|
| ID | 5743444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 672748 |
|---|
| End bp | 674523 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641291642 |
|---|
| Product | Beta-galactosidase |
|---|
| Protein accession | YP_001557656 |
|---|
| Protein GI | 160878688 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGG AAGAAAACGG AACTTTTCAA GAATCAATCC ATAAAGTAAA TTACGAAGAT
TGTTATAGAA GTAAAATGAT AAAGAGTGAT AGTTTATTTC TTGATTATTA TAGAGAGAAA
GAATATTTAA ACGGAACATG GAATTATGGT ATCGATCAAT ATGATAACTG TCTTAGAGCA
AAGTGGTTCG AAGAGGTTTA TTTTGATGAA GACGGAAGAC AGTATCCAGT GGATTTTAGT
TTCGATACCT GGGAGACGAT GAAGGTACCA TCCTGTTGGA ATACACAATC AGAGAAATAT
TTCCATTATG AAGGCAGCGT AGTATATACC CGAACCTTTC GCTACAAAAA TAATGGGGAA
AAAAGAGTCT TTCTTAAGTT TGGTGCAGTT AATTACGAAG CAAAAGTATT TGTAAATAAA
CAATTCGTGG GAATGCATCA AGGAGGATCT ACACCATTTG TAATTGAAGT GACAGGTATT
TTAGCAGAAG ATAACCGAAT TATGGTTGTT GCGAATAATA CAAGAAAGCG GACCAATGTC
CCTTGTGAAA ACACGGATTG GTTTAATTAT GGCGGAATTT ATCGTGATGT TGAGATAATT
CGTATGCCAG AATCCTTTAT TAAAGATGCA TTTTTATATC TTGTTCCAGA TGGAAGTTAT
AATAAGATTG CAGGAAAAAT CACTCTGGAG GGAAGCAATG CCAACAGCAG TGTTCAATTA
GAAATTAAAG AATTACAGAT AAATGAAGTG TTTGAAGTGA AAGATGGTGT GGTTGAATTT
AACCTAGAGG CACATCCTGA ACTTTGGTCC ACTGAAAATC CAAAACTTTA TGATGTGGTT
ATACGTTACG GAGAGGACTA CGTCAAAGAA AAAATAGGAT TCCGTGAAGT TAAAGTTTAT
GGAACAGATA TCTATTTAAA CGGAAAGAAG ATATTGTTAA AAGGTATCTG TGCTCATGAA
GAAAGTGTTA TCAATGGCAA GGCAGTAACA GAAGATGAAA TTAGAGAGAA TTTCCGCCTG
GCAAAAGAGA TGAACTGCAA TTACATGAGA CTAGCACATT ATCCACATAC AGAAAAGGCA
GCACGAATTG CAGATGAAAT TGGTATTATG CTATGGGAAG AGATTCCAGT TTATTGGGCA
ATCGAATTCG AGAATCCAGA TACCTATGCA GATGCATCTA ATCAGCTTTC TGAATTGATT
TTAAGAGACC GAAATAGAGC AAGCGTTATT ATCTGGTCAG TAGGAAATGA AAATGCAGAT
TCTGATTCAC GTCTAAGATT TATGAGTAAT TTAGTGAATA AAGCAAGAGA GCTAGACTCT
ACAAGAATGA TATCCGCAGC TTGCCTAGTA GACCTTAAGA AACTTTGTAT TGCTGATCGT
TTGGCTGACG TTATTGATAT TATAGGTCTT AACGAATATT TTGGCTGGTA TGAACCGGAT
TTTTCAAAAT TAATAAAGAT ATTTGAAAAT AGTAAACCAG ATAAGCCTGT AATTATCAGT
GAATTTGGAG CAGATGCAAG AGCTGGTGCA AGGGGAAGCA TGGATGATCT ATACACAGAA
GACAGACAGC TTAAGATTTA CCGTGATCAA ATTGATACAC TTAGTAAAAT AAGCTATGTA
AAAGGAATTA GCCCTTGGAT TTTGTTCGAT TTTAGGTGTC CGAGAAGACT TCACACGATG
CAAAATTATT ATAATCTTAA AGGACTACTC TCTGCTGATA AAAGCTATAA AAAGCCTGCG
TATTTCTTAA TGAAAGAGTT CTATAGAAAT TGGTAA
|
|---|
| Protein sequence | MQKEENGTFQ ESIHKVNYED CYRSKMIKSD SLFLDYYREK EYLNGTWNYG IDQYDNCLRA
KWFEEVYFDE DGRQYPVDFS FDTWETMKVP SCWNTQSEKY FHYEGSVVYT RTFRYKNNGE
KRVFLKFGAV NYEAKVFVNK QFVGMHQGGS TPFVIEVTGI LAEDNRIMVV ANNTRKRTNV
PCENTDWFNY GGIYRDVEII RMPESFIKDA FLYLVPDGSY NKIAGKITLE GSNANSSVQL
EIKELQINEV FEVKDGVVEF NLEAHPELWS TENPKLYDVV IRYGEDYVKE KIGFREVKVY
GTDIYLNGKK ILLKGICAHE ESVINGKAVT EDEIRENFRL AKEMNCNYMR LAHYPHTEKA
ARIADEIGIM LWEEIPVYWA IEFENPDTYA DASNQLSELI LRDRNRASVI IWSVGNENAD
SDSRLRFMSN LVNKARELDS TRMISAACLV DLKKLCIADR LADVIDIIGL NEYFGWYEPD
FSKLIKIFEN SKPDKPVIIS EFGADARAGA RGSMDDLYTE DRQLKIYRDQ IDTLSKISYV
KGISPWILFD FRCPRRLHTM QNYYNLKGLL SADKSYKKPA YFLMKEFYRN W
|
|---|
| |