| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0395 |
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| Symbol | |
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| ID | 5742263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 506211 |
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| End bp | 507890 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291507 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001557521 |
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| Protein GI | 160878553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA AGAAACTTGT AGCAATGGGG CTTTGCACAT GTCTAGCGGT AACTTTGTTA
GCTGGATGTG GCAAAAAGAA TGAGGATCAG GCAAACAATA ATGTAACAGC AACTCCATCA
GAGGGGCAAA GTACTCCATC CGGTGGTGAT TCGGGGAAAG ATGAGATGCC GGAAAATGTA
AATGCAGTTG GTGTCTATCC GATTGTAAAA GAACCAATTA CACTTAAGAT TATGGGACGT
AAGGATCCAG GAGCTACGGA TTGGGGCGAA CTTGAAGTAT TCAAACGTTT AACAAAAATC
ACTAACATTA ATTTTGAGTT TGAGTTATCA GAAGGTGACA CCTTTGTAGA GCAGAAGAAC
ATTGCATTAG TTGGTGGTGA ATATCCAGAC TTAATTTTAC GTGCAGATAC CTCTTCCATC
ACGGATGAAG AGACTTATGG TCCACAAGGA GTTTTTCTAG ACTTAACGGA TTTAATCGAC
AAATATGCTC CCAATATTAA AGCATTATTA CAGGAGCGTC CTGACATTAA AGCAGCCATT
ACTTCCATGG ATGGTAAGAT TTACGGATTA CCATATGCCT TCCAGACTGC TACAACGCAA
GGTCATACCG GTTTCTTTGA TTCTAAGTGG ATGGACAATG TTGGAATAAC AAAGGTTCCG
GAAACAACAG ATGAATTATA TGATATGTTA GTCAAGTTTA AAGAAATGGA TGCAAACGGA
AATGGTGATC TAAATGACGA GATTCCATTT AGTTGTTCCG GATTAAATAC AACAATTCGT
CGTCTTTTAA TCCCTGCATT TACAGGTACA GCAGAAGGCT TAGGATTTGA TATTAAAAAT
GGTGAAGTAG TATATGCGCC AGCTCTACCA GAGTATAAAG AGTTTTTAAT TTATACAAAC
AAGCTTTATA GTGAAGGGTT ACTTGATCCA GAGTTTTCAA CACAGACAAG TCAACAATGG
CAGGCTAAAG TAAAAGCGGG AATGTGCGGC GTATACTCCG CTTCTCCAAC CTTACTTGAT
CCGGAAGTGA CAATAACACA GCAGTTATCA CTACCTCCAT TAACCAGCAG TACCAATGAC
AAAAAAGTTG TAATCCAGCC AGATAACTTA TATCCGGCGA GAGGATTTAT CACAGACAAA
TGTAAAGACC CAGTAGCAGC AATCCGCTTA CTTGACATGT TCTATGCAAC GCCTGAAAAT
GCGGTTGAGG GCTTCTCTGG ACAGACCTTA TTCCTTGGCT GGGAGGGCGA GCATTGGGAA
TACACAAATG GCATGAAAGA TTTTTATCGC TGGATCGATC CAATCACTGG TTTTGGAGAT
ATCAACAAAT CCATCTCTGT AAATATGGAA TTACCGGGTT ACTTAAACTT CACTGCAGGT
CCTGCCGGAA ATCCTTTGAT GGAGATGAAG GTAGAACAAG TGAATAATAT GCAGAAACCT
TATTATACGA CTGCTTACCC TATCAATGCC AGATTTACAG CAGATGAGTC TGAGCGCGGT
AATGTAATCG AAAATGATTT ATATACCTAT GTAACAATGA TGACAACCAA GTTTATCATT
GGTGAAGTAA GTATTGATAA GTTTGATGAA TATATTGACA CTTTAAATAA AACAGGTCTT
CCAGAGCTAT TAGAAATCAA GAGAGCAGCT TTAGCAAGAT GGAATGAGGC TATGAACTAA
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| Protein sequence | MKFKKLVAMG LCTCLAVTLL AGCGKKNEDQ ANNNVTATPS EGQSTPSGGD SGKDEMPENV
NAVGVYPIVK EPITLKIMGR KDPGATDWGE LEVFKRLTKI TNINFEFELS EGDTFVEQKN
IALVGGEYPD LILRADTSSI TDEETYGPQG VFLDLTDLID KYAPNIKALL QERPDIKAAI
TSMDGKIYGL PYAFQTATTQ GHTGFFDSKW MDNVGITKVP ETTDELYDML VKFKEMDANG
NGDLNDEIPF SCSGLNTTIR RLLIPAFTGT AEGLGFDIKN GEVVYAPALP EYKEFLIYTN
KLYSEGLLDP EFSTQTSQQW QAKVKAGMCG VYSASPTLLD PEVTITQQLS LPPLTSSTND
KKVVIQPDNL YPARGFITDK CKDPVAAIRL LDMFYATPEN AVEGFSGQTL FLGWEGEHWE
YTNGMKDFYR WIDPITGFGD INKSISVNME LPGYLNFTAG PAGNPLMEMK VEQVNNMQKP
YYTTAYPINA RFTADESERG NVIENDLYTY VTMMTTKFII GEVSIDKFDE YIDTLNKTGL
PELLEIKRAA LARWNEAMN
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