| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0340 |
|---|
| Symbol | |
|---|
| ID | 5742186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 429392 |
|---|
| End bp | 430300 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641291430 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001557466 |
|---|
| Protein GI | 160878498 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TTACGTATAA AAGAAAAGGC ATTAAGGGTA GACTTAGTAC CCGTGTGGTA
ACGGGTATCA TATATTCATT CTGTGGTTTA TGTGCATTGA TTACGCTGTT ACCATTTTTA
TATATTGTAG CAGGTTCATT TGCTACAGAG AAAGAGTTAA TTGAAAGAGC ATTTTTTCTT
ATTCCGAGTC AAATTTCCTG GAATGCATAT CATTACATAA TAAAAACAGG GGCAATTATA
CTAGGTATCA AAAATTCATT ATATTTAACA ACAGTCGGTA CAATTATGAA CATGATTTTA
ATGACATTAT TCGCATATCC GCTATCAAGG AGAGGTTTCA GGGGAAAAAA TCTTATTTTA
AACATGGTAA TTTTAACAAT GCTATTACCA GTTGGGATGA TTCCAATGTT TATGTTGATA
CGTGGTATTG GTTGGTACGA TAGTTATCTT GCTTTGACTA TTCCAGGAGC GATTAATGCA
TTTAACATGA TTATTATAAA AAAATTCTTT CAGGGTTTAT CACTAGAACT TGAAGATGCA
GCAAGAATTG ATGGGGCTTC TGACTGGAAG ATCTTTAGAA AGGTTGCCTT ACCGTTATCA
AAACCTGTAC TTGCTTCCAT AACTTTGTTT ACAGCAGTTG GATATTGGAA CAATTACTTT
GGACCGATGA TTTATTTAAA CAGTCAGAAA AAATATACAG CTCAGTTATT CTTGCGCCAA
ATAGTTATGA CTTCCCAAGG TATTTCAAAA GATGGAAGCC TCATTGACTG GGGGGATTTT
GGTGCCCCAC CGACGGTTGC GATTCGTATG GCTGCGACTG TGATTACAAC AGTGCCAATT
CTTATGGTAT ATCCTTTTGT ACAAAAGCAT TTTGCAAAAG GAGTTATGGT TGGTTCTGTG
AAAGGATGA
|
|---|
| Protein sequence | MKIFTYKRKG IKGRLSTRVV TGIIYSFCGL CALITLLPFL YIVAGSFATE KELIERAFFL
IPSQISWNAY HYIIKTGAII LGIKNSLYLT TVGTIMNMIL MTLFAYPLSR RGFRGKNLIL
NMVILTMLLP VGMIPMFMLI RGIGWYDSYL ALTIPGAINA FNMIIIKKFF QGLSLELEDA
ARIDGASDWK IFRKVALPLS KPVLASITLF TAVGYWNNYF GPMIYLNSQK KYTAQLFLRQ
IVMTSQGISK DGSLIDWGDF GAPPTVAIRM AATVITTVPI LMVYPFVQKH FAKGVMVGSV
KG
|
|---|
| |