Gene Cphamn1_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2137 
Symbol 
ID6375831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2313446 
End bp2314636 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content50% 
IMG OID642684627 
Productamine oxidase 
Protein accessionYP_001960526 
Protein GI189501056 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0697348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTG ATGTCGTGAT CGTTGGCGGC GGTATCAGCG GGTTGAGCCT TGCGTTTTAC 
TGCGCCAAAG CGGGACTCAA GACCACCATA CTTGAAAAAA ATGAGAGTGC AGGGGGCTCA
TTCAACTCGC ACCGGTATAC GGACAATGAC GCATCATTCT GGTTCGAGCT TGGCGCGCAT
ACCTGTTACA ATTCCTATCA GAACCTGCTC GATATTGTGG AAGCGTGCCA CCTATCCGAT
TCCATCATAC CCCGGGAAAA GGTTCCATTC ATGCTTCTCG ATGGAAAGCA ACTTAAATCG
GTGTTCTCTT CGCTCAATAT TTTCGAAGCG CTCAAATCAG TTCCGAACAT GTTTTCGCTC
AAGAAAGAGG GATTGAGTGT TCGTGAGTAC TACTCGAAAA TCGTAGGAGT CGGCAACTAC
AACAAGACCC TCAGCCACTT CTTCAATGCT GTGCCATCCC AGCCCACCGA TGATTTTCCT
GCTGACATGA TGTTTAAATC CCGGCCCAAG CGAAAAGAGG TGCTGAAAAA CTATACCTTC
ACGGAAGGCC TGCAATCTGT TACACGGGCG ATTGCTAAAA GCAAGGGGAT CAACGTCTTT
ACCAGTCAGG AGGTGACCGG TATCGAGTAT CTTGAAGGGC GTTACGCGAT TACGACAACA
ACCGGAATGA TCCATTCTGC CGCGACACTT GCTCTTGCAA CGCCTTCAGC GGTATCCTCC
CGCCTTCTGC AGACGATCGA GGCTGATATT GCCGGGCATC TGGCCCTGCT CAAAGCGGCA
TCTGTGGATT CCATAGGGGT TGTCGTGAAG AAAAAAGATC TTTCTGTCAA ACCGGTCGCG
GCGATCATCT CTCCGAACGA TATTTTCTTT TCCGCTGTCT CACGTGATAC CGTTCCAGAC
GACAACTATC GCGGCTTCGC GTTTCATTTC AGGCCTGGAG AGAGCGAGGC GGACAAGATG
CGGAGAATTG TTGAGGTTCT TGGTATTTCA GCAGACAAAA TAATCCATAA ACACGAGGTG
ATCAATACGG TTCCCTCTCT GAAAGTAGGG CACAAGTCGT GGCTTGAAAA GATGGACACG
ATGCTTTCAG GAAAAAATCT GCTGCTGACC GGAAATTACT TTGGCGGTAT GGCTATAGAG
GATTGCGTTT CCCGATCGCT CAGCGAGAGC GCACGGTTGA AGAGAGGGTG A
 
Protein sequence
MKSDVVIVGG GISGLSLAFY CAKAGLKTTI LEKNESAGGS FNSHRYTDND ASFWFELGAH 
TCYNSYQNLL DIVEACHLSD SIIPREKVPF MLLDGKQLKS VFSSLNIFEA LKSVPNMFSL
KKEGLSVREY YSKIVGVGNY NKTLSHFFNA VPSQPTDDFP ADMMFKSRPK RKEVLKNYTF
TEGLQSVTRA IAKSKGINVF TSQEVTGIEY LEGRYAITTT TGMIHSAATL ALATPSAVSS
RLLQTIEADI AGHLALLKAA SVDSIGVVVK KKDLSVKPVA AIISPNDIFF SAVSRDTVPD
DNYRGFAFHF RPGESEADKM RRIVEVLGIS ADKIIHKHEV INTVPSLKVG HKSWLEKMDT
MLSGKNLLLT GNYFGGMAIE DCVSRSLSES ARLKRG