Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2137 |
Symbol | |
ID | 6375831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2313446 |
End bp | 2314636 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684627 |
Product | amine oxidase |
Protein accession | YP_001960526 |
Protein GI | 189501056 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0697348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGTG ATGTCGTGAT CGTTGGCGGC GGTATCAGCG GGTTGAGCCT TGCGTTTTAC TGCGCCAAAG CGGGACTCAA GACCACCATA CTTGAAAAAA ATGAGAGTGC AGGGGGCTCA TTCAACTCGC ACCGGTATAC GGACAATGAC GCATCATTCT GGTTCGAGCT TGGCGCGCAT ACCTGTTACA ATTCCTATCA GAACCTGCTC GATATTGTGG AAGCGTGCCA CCTATCCGAT TCCATCATAC CCCGGGAAAA GGTTCCATTC ATGCTTCTCG ATGGAAAGCA ACTTAAATCG GTGTTCTCTT CGCTCAATAT TTTCGAAGCG CTCAAATCAG TTCCGAACAT GTTTTCGCTC AAGAAAGAGG GATTGAGTGT TCGTGAGTAC TACTCGAAAA TCGTAGGAGT CGGCAACTAC AACAAGACCC TCAGCCACTT CTTCAATGCT GTGCCATCCC AGCCCACCGA TGATTTTCCT GCTGACATGA TGTTTAAATC CCGGCCCAAG CGAAAAGAGG TGCTGAAAAA CTATACCTTC ACGGAAGGCC TGCAATCTGT TACACGGGCG ATTGCTAAAA GCAAGGGGAT CAACGTCTTT ACCAGTCAGG AGGTGACCGG TATCGAGTAT CTTGAAGGGC GTTACGCGAT TACGACAACA ACCGGAATGA TCCATTCTGC CGCGACACTT GCTCTTGCAA CGCCTTCAGC GGTATCCTCC CGCCTTCTGC AGACGATCGA GGCTGATATT GCCGGGCATC TGGCCCTGCT CAAAGCGGCA TCTGTGGATT CCATAGGGGT TGTCGTGAAG AAAAAAGATC TTTCTGTCAA ACCGGTCGCG GCGATCATCT CTCCGAACGA TATTTTCTTT TCCGCTGTCT CACGTGATAC CGTTCCAGAC GACAACTATC GCGGCTTCGC GTTTCATTTC AGGCCTGGAG AGAGCGAGGC GGACAAGATG CGGAGAATTG TTGAGGTTCT TGGTATTTCA GCAGACAAAA TAATCCATAA ACACGAGGTG ATCAATACGG TTCCCTCTCT GAAAGTAGGG CACAAGTCGT GGCTTGAAAA GATGGACACG ATGCTTTCAG GAAAAAATCT GCTGCTGACC GGAAATTACT TTGGCGGTAT GGCTATAGAG GATTGCGTTT CCCGATCGCT CAGCGAGAGC GCACGGTTGA AGAGAGGGTG A
|
Protein sequence | MKSDVVIVGG GISGLSLAFY CAKAGLKTTI LEKNESAGGS FNSHRYTDND ASFWFELGAH TCYNSYQNLL DIVEACHLSD SIIPREKVPF MLLDGKQLKS VFSSLNIFEA LKSVPNMFSL KKEGLSVREY YSKIVGVGNY NKTLSHFFNA VPSQPTDDFP ADMMFKSRPK RKEVLKNYTF TEGLQSVTRA IAKSKGINVF TSQEVTGIEY LEGRYAITTT TGMIHSAATL ALATPSAVSS RLLQTIEADI AGHLALLKAA SVDSIGVVVK KKDLSVKPVA AIISPNDIFF SAVSRDTVPD DNYRGFAFHF RPGESEADKM RRIVEVLGIS ADKIIHKHEV INTVPSLKVG HKSWLEKMDT MLSGKNLLLT GNYFGGMAIE DCVSRSLSES ARLKRG
|
| |