Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1703 |
Symbol | |
ID | 6375390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1845665 |
End bp | 1845892 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642684196 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001960102 |
Protein GI | 189500632 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.864451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000407329 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTGCA TCCAAGCTCA GGCTCTTATG AGCGCAGCGG TAGATAACGA GCTGTCGCTT AAAGAACAAG AGGGTTTTGA AAAACATCTC CTCAAATGTC CTACCTGCTT CAATGAATTC AAGGAAGCGC AAAAAACCAA GCACATCATC AGGGAAAAGA TCACACGGTT CACAGCACCA CCGTCCCTTG TCAAGTCTAT TCTCGAACTC TGCGATTCGC ATATCTGA
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Protein sequence | MNCIQAQALM SAAVDNELSL KEQEGFEKHL LKCPTCFNEF KEAQKTKHII REKITRFTAP PSLVKSILEL CDSHI
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