Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1285 |
Symbol | |
ID | 6374962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1397800 |
End bp | 1398270 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642683782 |
Product | Endoribonuclease L-PSP |
Protein accession | YP_001959697 |
Protein GI | 189500227 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.770765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAA TTGAAACACG ATTAAAGAAT GCAGGCATAC TGCTGCCTGA GACGCCCACT CCTGCAGGTA TATATGTTCC CGCGCTGCGA TCAGGAGGGC TGGTTTATAC ATCCGGACAG CTCCCGTTCG TTGACGGCAG CCTCCTTGAG CAGGGGGGCA GGGGCAAAGT TAACGAAATC AATCAGGCTC AGGCAGCGAT TGCCGCACGT GTGGCGACCC TGAACGCTCT TGCGGCTGTA AAAGGGGCGG TAGGCAGCCT TGACGCTGTT GAAAGGGTGC TGAAACTGAC GGTTTACGTC GCCAGCGAAT CATTTTTTTC CAATCAGCAC ATCGTCGCCA ATGGAGCATC GGCGGTATTG TATGAAGCGT TTGGTGAAAA TGGCAAGCAT GTAAGAAGTG CCATAGGGGT AGCAGAGCTT CCTTTGGATG CCAGTGTGGA GCTTGAGCTT GTTGTCAGTT GTTCTGATTA A
|
Protein sequence | MSEIETRLKN AGILLPETPT PAGIYVPALR SGGLVYTSGQ LPFVDGSLLE QGGRGKVNEI NQAQAAIAAR VATLNALAAV KGAVGSLDAV ERVLKLTVYV ASESFFSNQH IVANGASAVL YEAFGENGKH VRSAIGVAEL PLDASVELEL VVSCSD
|
| |