Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1151 |
Symbol | |
ID | 6374826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1240947 |
End bp | 1243178 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642683653 |
Product | hypothetical protein |
Protein accession | YP_001959570 |
Protein GI | 189500100 |
COG category | [S] Function unknown |
COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.515935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0297929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAAT CAATCACCAT CTCCAGTATT GCAACCTTCG GAACAACGCC GGAGCAAGTC AACGCGCTTT CCCTATTCAA CTTCTTTTTC GGATCAAATG GCACCGGCAA AACAACCCTC AGCCGAGTGA TCGCGGATGA AACAAAGTTC CCGATGTGCA GTGTCAGTTG GAAAGCGGGG ACTAAACTAC AGCCGCTTGT TTACAACCAC GATTTCGTCG AGCGAAACTT CAACCAATCG GTAGAGCTAA AGGGAGTCTT TACGCTGGGT GAGAAGCAAG TTGACACACT CGCGAAGATA ACTACGACCA AAAGCGAACT CGATGCGCTT TCCGCCAGGA TCGAAACGCT AACTAAAGGG CTACAGGGCG AAGATGGAAA TAGCGGCAAG AAAGGAGAGT TGGCAACACT TGACGCTGGA TTGAAAGACA AGTGTTGGGC GCAAAAGCAG AAGCATGATG CCAAATTGCA AGGAGCCTTT GAGGGGTATC GGAACAGTTC TGAGAAGTTC AAAGGAAAAG TACTTCAGGA ACTAGCAGCG AATAAGGCGA CCCTCCTCAC CTTAGTGGAG TTGGAAAAAA AGGCTGAAAG CGTCTTCGGA CCTACGCCGA CAAAAGAAGC ACCTGTTCCC TCCGTCGATG CATCTAAGCT TCTTGCGAAC GAGGCGAATC CCATTCTGAA GAAGCGCGTT TTCGGCAAAG AAGACGTCGA TATCGCTGCG ATGATTAAAA AACTCGGGAA TAGTGACTGG GTTCGGGAAG GAAGGACATT CTACCACGTG AACGAGGGCG TCTGTCCCTT TTGCCAGCAG AGCACAAGCG AAGCGTTCGC TCTAAGCCTG AACGAATACT TCGACGAGAC ATTTGTGGCA GACAGCAAAG CGATCGACGA CCTCGCCACG GACTACGCCA CCGAGGCGGC CCGGATTCAG GATCAATTTA CTTCAATCAT CGCCTCACCA TCCAAGTTTC TCGATGTCGA GAAGCTTAAA GCAGAAAAGG ACTTACTCGA TGCGAGAATC ACACTGAATA ATCAGCGCCT AGCCGGAAAG AAAAAGGAGG CAAACCGGGT GGTCGAGCTG GAATCGCTAA GTAGTGTCTC CGCGGCAATA AAAGACCTAA TCGATGCGGC CAACACCCAA GTGGCGTCAC ACAACAAAAT CGTCGCAAAC CTCACATCTG AGCGGAATAC CCTGACTGCG CAAGTGTGGA AGTTCGTCCT CGAAGAGTTG AAAGCTGACC TCACTGCGTT CAAGACCGCC AAAGACGGTT TGGACAAAGC CATCTCGGCA ATGACAACTC AAGTCACCAA TGCGACAACG GACAAGGCAA AGAAGGTGGC TGATCTTCGC GAACTGGAAA AGCAAACGAC CAGCATCCAA CCGACAATTG ACGGCATCAA CAGTCTTCTT TCGTCGTTTG GATTCCAAGG CTTTAAGCTC GCGAAAGCGG CAACCGGGAC TTCCTATAAG TTGGTTCGTT CGGATGGTTC TGATGCTAAG GCGACATTGA GCGAAGGTGA GAAGACGTTC GTTACTTTCC TCTATTTCTA CCACCTGCTC AAAGGCAGCG ACTCAGAAAG CGGGATGACA ACTGACCGTG TAGTTGTCTT TGACGACCCA GTTTCTAGTC TCGACAGCGA TATTCTCTTC ATCGTCAGCA GTCTCATCAA AGGACTATTC GATGAGGTGC GTTCAGGTTC GGGTCACATA AAACAGATCT TCGTTCTTAC GCACAACGTC TATTTCCACA AGGAAGTCAC CTATAACCCA AAGCGGAAGG ATGTCGCGAT GAACGAGGAG AGTTTTTGGA TCGTGCGCAA ACCCGGGCTA GCCACAAAAA TTGAGAATCA CACGACGAAT CCGATCAAAA CGTCCTACGA GCTGCTCTGG GCCGAGGTTC GCAAACCCGA GCGCTCGAAT CTCGCTATCC AAAATACGCT GCGGCGCATC CTCGAAAACT ACTTCAAGAT TCTTGGAGGC ATTGACTTTG ACCAGCTATG CGCGTTGTTC AAAGGAAGAG AGAAGATAAT CTGCAAGTCG CTCTGCTCCT GGGTGAATGA TGGATCGCAC TACGCGCACG ATGATCTCTA CGTTTCAATC GATGATTCCT TGGTGGACAC CTACCTCACG GTATTTAGGG CAATTTTCGA CAAGTCTGGC CACAGTTCGC ATTACAAGAT GATGATGGGT GATGCCTACG TGGACGATAT ATCTGAAGCA GCGCAGGCCT GA
|
Protein sequence | MIESITISSI ATFGTTPEQV NALSLFNFFF GSNGTGKTTL SRVIADETKF PMCSVSWKAG TKLQPLVYNH DFVERNFNQS VELKGVFTLG EKQVDTLAKI TTTKSELDAL SARIETLTKG LQGEDGNSGK KGELATLDAG LKDKCWAQKQ KHDAKLQGAF EGYRNSSEKF KGKVLQELAA NKATLLTLVE LEKKAESVFG PTPTKEAPVP SVDASKLLAN EANPILKKRV FGKEDVDIAA MIKKLGNSDW VREGRTFYHV NEGVCPFCQQ STSEAFALSL NEYFDETFVA DSKAIDDLAT DYATEAARIQ DQFTSIIASP SKFLDVEKLK AEKDLLDARI TLNNQRLAGK KKEANRVVEL ESLSSVSAAI KDLIDAANTQ VASHNKIVAN LTSERNTLTA QVWKFVLEEL KADLTAFKTA KDGLDKAISA MTTQVTNATT DKAKKVADLR ELEKQTTSIQ PTIDGINSLL SSFGFQGFKL AKAATGTSYK LVRSDGSDAK ATLSEGEKTF VTFLYFYHLL KGSDSESGMT TDRVVVFDDP VSSLDSDILF IVSSLIKGLF DEVRSGSGHI KQIFVLTHNV YFHKEVTYNP KRKDVAMNEE SFWIVRKPGL ATKIENHTTN PIKTSYELLW AEVRKPERSN LAIQNTLRRI LENYFKILGG IDFDQLCALF KGREKIICKS LCSWVNDGSH YAHDDLYVSI DDSLVDTYLT VFRAIFDKSG HSSHYKMMMG DAYVDDISEA AQA
|
| |