| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0560 |
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| Symbol | |
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| ID | 6374224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 592913 |
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| End bp | 594703 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642683075 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_001959002 |
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| Protein GI | 189499532 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.789825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA AGAAAATTGG GGCGGGGAAG ATTGGGTGCA TCGTTGTGGT GCTGGTTTTT
CTTGTTCTCG CAATAGGTGT ATACCGGCTC TTTACGGCAC AAAAATCGTT GCCGGAAGAG
TTTGTGCTGA AGATAGATAT TTCAGGGGAT ATCAGGGAAA CGGTTGATAC CGGATTTGCT
CTGCCATTTG AGCGGGAATC GCAGGAACTG TCCCTGCAGG ATATCATATT TCTACTTGAC
AGGGCAAGTG AGGATACACG AATCAAAGGT ATTTTACTCG ATATCGACGG GGTTCGAACC
GGGTCGGCAA AAATCCAGCA GATTCAGCGA GCGATCGAAC GGACGAGGAA CTCAGGCAAA
CTGGTAAACG CATTTCTTCG AAATGCGGGA GACCAGGATG TCTGGCTCGC TTCGGCATGT
GATGCAATGA TTGCGGAACG GGGGAATTTT CTGCTGCTCG ACGGTCTGAG GGCTGAACTG
CTTTTCTATA CAGGGACGCT TGAAAAACTC GGGGTTTCTT TTCAGGCCGT TCAATGGACC
GACTGGAAAA GCGGCGTTGA GCCGTTTACA AGGCTTGCTG CAAGTCCGGA ATTCAGAGAA
CGTATAGAGA TGAGCCTGGA TAGCGTCTAT GCGGCTTATA CGGGTTATGT GACAAAGCAG
AGAGACATTC CGCTGGAAAC GTATGAGATC ATTATCAATG AAAAGACAGT TTTGTCGGCT
GATCAGGCAA AAGAACTCAA GGTTGTCGAT GAAGTCAACG GGCACTGGGA GTACCTGGAA
CGGTTGAAGA AATCCTATGG CAAGGGAAAG AACAATCATG ATGAAGACGA TGTTCTTGTC
AGCGGTGTGC GGTATAAAGC CGCGGTTCCC TGGCCATACA AGCCTGAAAC AAAAGAGCAT
ATTGCCGTGA TAACGGCGTC GGGACCGATT GTCCGATCGT CGGATGATAT GGCGGCGGGA
ACTGAGCAGG GTTTTGACGA AGAGACGCTC AGAAGCTCTG TTCAGGCGGC ACTCGACGAC
GAAAGTGTCA AGGCAATAGT GCTCCGTATC GACAGCCCCG GAGGGGACGC TTTGGCCTCG
GCGAATATGC TGCAGGTTCT CGATTCGGCG AGGGTTAAAA AGCCGATTGT GACATCGATG
TCAAGCGTTG CAGCGTCAGG AGGTTACATG ATAGCGCTTG CGGCGGACAG CATCTTTGCC
GAACCACTTA CCGTTACCGG TTCAATCGGT GTTTATGCGC TAAAGCCGGA GATCAGTAAA
CTTCAGGAGA AAATCGCTTT GAATCGTGAG GTGTTTACGA GAGGAAAAAA CGCCGACGCG
TATACTGTTT TCAAGCCGCT TGACGAAGCG GGAATGGCCA AGTTCATGGA AACGACGGGC
TGGATTTACG ATGATTTTCT TGACAAAGTT GTCCGGTCGA GAAAAATGAC GAGAGAAGAA
GTTGATGCGG TAGCCGGTGG AAGGGTATGG ATGGGAGAGG CGGCTGTGAA AAACGGTCTG
GTTGACCGGA TCGGCGGATT GCCGGAGGCA CTTCGAGCTG CCCAGGTGTT GGCAGGAATA
GATTCTGCCG CTGTGCCGGG ATTAAAGTTC TATCCCGAAC CTCAGGGGCT GATGGATTAC
CTTTTTGGCG GCGGTCCGGG AATCGAAAGC CATCTTTTCA GCAGCAAGAT TCCTGCCGGA
AGCTTTGCCG ACCGTTCAAT GCGAACCCTC GATCTTCTGA TGCGTCTGGA GCAGCAGCCG
GGGGGAATGT ACAGGATGAC GATGTTGCCT TACGACTTGA GAGTGGAATA A
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| Protein sequence | MAKKKIGAGK IGCIVVVLVF LVLAIGVYRL FTAQKSLPEE FVLKIDISGD IRETVDTGFA
LPFERESQEL SLQDIIFLLD RASEDTRIKG ILLDIDGVRT GSAKIQQIQR AIERTRNSGK
LVNAFLRNAG DQDVWLASAC DAMIAERGNF LLLDGLRAEL LFYTGTLEKL GVSFQAVQWT
DWKSGVEPFT RLAASPEFRE RIEMSLDSVY AAYTGYVTKQ RDIPLETYEI IINEKTVLSA
DQAKELKVVD EVNGHWEYLE RLKKSYGKGK NNHDEDDVLV SGVRYKAAVP WPYKPETKEH
IAVITASGPI VRSSDDMAAG TEQGFDEETL RSSVQAALDD ESVKAIVLRI DSPGGDALAS
ANMLQVLDSA RVKKPIVTSM SSVAASGGYM IALAADSIFA EPLTVTGSIG VYALKPEISK
LQEKIALNRE VFTRGKNADA YTVFKPLDEA GMAKFMETTG WIYDDFLDKV VRSRKMTREE
VDAVAGGRVW MGEAAVKNGL VDRIGGLPEA LRAAQVLAGI DSAAVPGLKF YPEPQGLMDY
LFGGGPGIES HLFSSKIPAG SFADRSMRTL DLLMRLEQQP GGMYRMTMLP YDLRVE
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