Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1529 |
Symbol | |
ID | 4569579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1736450 |
End bp | 1738105 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639766111 |
Product | C-terminal processing peptidase-3 |
Protein accession | YP_911975 |
Protein GI | 119357331 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTG TTCTTACGGT TGTTATGATG ATCGTTGTCC TTTCATTCGG AATATTTCTG GGCACCAGGC TTAATACGGG GCATGAGCAG GCACCTGGAT CACTAAAAAA AATGTATGAA GCATATGGTT TGATCCGGGA GCTTTATGTG GATGAGGTTC AGGGAGATAG TCTCGTGAAC TCTTCGATCA AGGGGATGGT AGACTATCTC GATCCTCATT CCGTCTATCT TGAGCCTGAA AAGGTTGTCT ACTCTCAAGC TGAGCTTGAG GGTAATTTTG ACGGAATTGG TATAGAGTTC GATATTATCA GCGATACGCT TCTTGTTGTT TCGCCGTTAT CGGGGGGGCC GAGTGCGGCT GTAGGCGTTG CCGCAGGCGA CAGGATTCTG GCGATCGATT CGGTTTCCGC AATAGGAATT ACGCATCAGG ATGTTTTGAG AAAGTTGAGA GGTACCCGAG GATCTCTTGT CTATTTGCGA GTATTCCGTC CTTTCAACGG GAAATATCTT GATTTCAAAA TTACCAGGGG GCGGATTACG ACATCGTCTG TCGACGCGGC ATTTGTTCTT CCAAACGGCA CCGGATATAT CAGATTAAGC CGTTTTGCAG AAACAACTGC CGATGAGTTC CGTGCCGCAC TTGCCAGGTT GAAAAAACAG GGGATGAAAA AGCTGCTTGT TGATTTGCGG GGAAATCCCG GAGGTATTCT CGATCAGGCG GTAAGCGTAG CCGATGAATT TCTTCCGAAA GGGAAGATGA TTGTCTATAC AAAGAGTGTC AAGAACAGTA TAGAGGACGC TCAATATCTG GCAACGTCAA ATGGCGGTTA TGAAACGGGA GAGGTTATTC TGCTTGTCGA CAGGGGGAGC GCGTCAGCTT CCGAAATTCT TGCCGGGGCG CTTCAGGATA ACAGACGGGC GCTTGTACTT GGCGAGTTGA CGTTTGGCAA GGGTCTTGTG CAGAGGCAGT ATCCGTTTAA AGACGGCTCG GCACTTCGTC TCACCGTCTC TCGTTACTAT ACTCCTTCAG GTCGTCAGAT ACAACGTCAC TACAAAAAGG GTGTTGACGG GCGCGAATCA TATTATAATG AAGCCGCGAC AAGCCTTACG CCCCAGAAAC TGTTTGCAGA CAATGATAGT TTATTGTATT TAAAAAATGG CGATATTTCT GTGTACAGAA CTGGCGGTTT CTCCGCGATA CTCTCAGTAC CTGCTCAGAA AAGCGGCGAT TCGAGGAGTG TTGCTGCGTT GAGGAATGCC GGAGGAGTTG TTCCCGATTA TTGGGTAACC GGTAAGCCCT ATTCCGATTT TTATCAGGAA CTGTACCGTA CAGGTTCTTT CGATGATCTT GCGCAAAGAG TGCTTGACAA CCCTGCAAGT TCTGTTCAGC AGTATCGGAA ATCCATGGAG CGGTTTCTTT CGGAATATTC TCAGGACAGC AGACTGGAGT CGCTTGTCAG GAAAACGTGT GAGGCTAAAA AAATACGGTT TGACCAGTCG GGGTTTCTTT TTGATCGCAG TAACATTGCT CTGGCAATAA AAGCAAGAAT TGCCCACCAG CTTTTCGGTG CTGAAGCGCA GATAAGGGTA TATGTTGTTC AATCAGATCC TCTTGTGAAA TTTTCTTCTC AAGTTCCTGT TACTCTTGTT CGCTGA
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Protein sequence | MSRVLTVVMM IVVLSFGIFL GTRLNTGHEQ APGSLKKMYE AYGLIRELYV DEVQGDSLVN SSIKGMVDYL DPHSVYLEPE KVVYSQAELE GNFDGIGIEF DIISDTLLVV SPLSGGPSAA VGVAAGDRIL AIDSVSAIGI THQDVLRKLR GTRGSLVYLR VFRPFNGKYL DFKITRGRIT TSSVDAAFVL PNGTGYIRLS RFAETTADEF RAALARLKKQ GMKKLLVDLR GNPGGILDQA VSVADEFLPK GKMIVYTKSV KNSIEDAQYL ATSNGGYETG EVILLVDRGS ASASEILAGA LQDNRRALVL GELTFGKGLV QRQYPFKDGS ALRLTVSRYY TPSGRQIQRH YKKGVDGRES YYNEAATSLT PQKLFADNDS LLYLKNGDIS VYRTGGFSAI LSVPAQKSGD SRSVAALRNA GGVVPDYWVT GKPYSDFYQE LYRTGSFDDL AQRVLDNPAS SVQQYRKSME RFLSEYSQDS RLESLVRKTC EAKKIRFDQS GFLFDRSNIA LAIKARIAHQ LFGAEAQIRV YVVQSDPLVK FSSQVPVTLV R
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