Gene Coch_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1628 
Symbol 
ID8368074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1942370 
End bp1942858 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content33% 
IMG OID644984068 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003141734 
Protein GI256820455 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCAT TAGACCGTAT TGATTTAGCA CTTTTAGATG AATTACAACA AGATAGCAAA 
CAATCTATTA AAAAATTATC CGAGAAAGTA AGCCTGTCAA TCACTCCAGT TCACGAACGT 
ATCAAACGAT TAGAATCACT AGGGATAATT CAAAGATATG TAGCGGTAGC CAATCCTAAA 
GCTCTCGGAA AAAAATTGGT AGCTTATTGT CAAGTAAAAC TTCTTAAGCA TAGTGCCGAA 
TTATTTAATG AGTTCGAAAA ATATATAAGC ACTTTAGATG AAGTGTTAGA AGCCTCGTAT 
ATGGCAGGAG GCTATGACTT TCTGCTAAAA GTTATGCTCA ACGATATGGA AGATTATCAG 
AGATTTGTAG TACACAAAAT ATCTAAATTA GAAATTATCT CTAACATTCA AAGCTCTTTC 
GTAATACAAG AAATCAAGAA CACCTCTATG ATTAAATGTC TACGTGAGGA AGCTGAAAAA 
ACTAATTAA
 
Protein sequence
MYALDRIDLA LLDELQQDSK QSIKKLSEKV SLSITPVHER IKRLESLGII QRYVAVANPK 
ALGKKLVAYC QVKLLKHSAE LFNEFEKYIS TLDEVLEASY MAGGYDFLLK VMLNDMEDYQ 
RFVVHKISKL EIISNIQSSF VIQEIKNTSM IKCLREEAEK TN