| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1122 |
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| Symbol | |
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| ID | 8367544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1330918 |
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| End bp | 1332453 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983550 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003141238 |
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| Protein GI | 256819959 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA ATATAAACCA TATTATAGCA ATAGGATTAA TGGCAACAAG TGTTGCCCTC
TTCACCCATT GCAACAAGTT CGACCAAGAG CCTCAAGGCG AATGGTATGA AGGAGAACAA
AAAGGAGCAG CTGGTACTTA TGAAGCCGAA GTATTCGGGA TGTATGGTAA AATGCGAGCT
TCTTCTATCA CGTCAGGATT ACCAGCTTTG GCGGTACACA GCTTTCGCAG TGAAGATGCC
GAAAAAGGCT CTAACGCAGG AGATTCAGCT GATTCTAAGA ATGTAGACGA ATTCAATTAC
GTAGCTACCA ATGCTCTTGT ATCACAGTAT TACGACGGAA ACTATGAATT GATTTTCGCA
GCCAATACCG TAATTGACAA GATTAATAAT GCTGATCAAG CCTCTTTGGC AGAAACAGAT
AAAGTGAACA GAGGAGAAGC TCATTTCTTC CGTGCTTATG CTTTTTTCAA TTTGGTGCGC
GCTTTTGGTG AAGTACCTCT TATTAACTTC TCGGTGAAAA GTAGAGATGA AGCCAATAAA
CCAAAAGCAT CAGTAGAAAA CATTTACGCA CAAATTGATG CTGACCTTGC TATTGCCGAG
CGCGATTTAC CACGAATGTG GCCTACTACT TTTGTAGGAC GCCTTACTTG GGGAGCTGCT
CGCGCCCTGC ACGCTCGCAC CTATATGATG CGTAGTAATT GGCAAGAAAT GTATAGCGCT
TCTGTAGATG TAATTAACTC AGGATTGTAT AATCTAAGTG CCGATTACAA TAAGATTTTC
CGTGAGACAG GCGAGAATGG ACCCGGTTCT ATTTTTGAAT TGCAATGCAC TTTTGATAAG
GCATACGGAG CAGAACAAGT AGGAAGTACT TTTGCCCAAG TACAAGGAGT ACGCGGTTCT
GGACAATGGG ATTTCGGTTG GGGTTTCAAC TGTCCTACTC AACTCTTAGC TGATGCTTTT
GAAGCAGGTG ACCCTCGCAA AGATGAAACC TTGCTTTATT TTGCTAAAAA TATAGCAGAA
GCTAACGCTA TGCAACCAAA CACACCCTAT GGCGAAAAAC CTATCGCTAA TAATGATGTA
GTGAATAAGT ATTACAACAA GAAAGTATAT ACTGATCCTG CTTTGCGTCG CACCAATAGC
AAGTTTGGTT ATTGGTTCAA TATTCGTCTT ATTCGTTATT CCGATGTACT CTTAATGGCT
GCCGAAGCAG CTAATGAGCT TGGCAACAGC GCCGAAGCCC TTACCTACTT GGAACAAGTG
CGCGCCCGTG CAAGACGAAC TAGTAGTACC CCCGTGCTTC CTGCCGTTAC TACCACTAAT
CAAAGTGATT TGCGTAAGGC TATTCGTCAC GAGCGCCGTG TAGAACTGGG TATGGAGTTT
GACCGCTTTT ATGACTTAGT ACGTTGGAAT ATAGATGTAG AAACTCTTCA TAATGCAAAT
AAAGCCTCTT ATCAAGTAAA ACATCGTTTG TTTCCTTTAC CACAAACACA GATAGACCGT
TCTAATGGAG TACTCGTTCA AAACCCTAAT TATTAA
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| Protein sequence | MKKNINHIIA IGLMATSVAL FTHCNKFDQE PQGEWYEGEQ KGAAGTYEAE VFGMYGKMRA
SSITSGLPAL AVHSFRSEDA EKGSNAGDSA DSKNVDEFNY VATNALVSQY YDGNYELIFA
ANTVIDKINN ADQASLAETD KVNRGEAHFF RAYAFFNLVR AFGEVPLINF SVKSRDEANK
PKASVENIYA QIDADLAIAE RDLPRMWPTT FVGRLTWGAA RALHARTYMM RSNWQEMYSA
SVDVINSGLY NLSADYNKIF RETGENGPGS IFELQCTFDK AYGAEQVGST FAQVQGVRGS
GQWDFGWGFN CPTQLLADAF EAGDPRKDET LLYFAKNIAE ANAMQPNTPY GEKPIANNDV
VNKYYNKKVY TDPALRRTNS KFGYWFNIRL IRYSDVLLMA AEAANELGNS AEALTYLEQV
RARARRTSST PVLPAVTTTN QSDLRKAIRH ERRVELGMEF DRFYDLVRWN IDVETLHNAN
KASYQVKHRL FPLPQTQIDR SNGVLVQNPN Y
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