| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1045 |
|---|
| Symbol | |
|---|
| ID | 8367467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1240017 |
|---|
| End bp | 1241111 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644983473 |
|---|
| Product | methionine-R-sulfoxide reductase |
|---|
| Protein accession | YP_003141161 |
|---|
| Protein GI | 256819882 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAG CTTTCACAAC AGGGTGTGCT AACGGCAATA GCCAAAGAAC AACCCCACTT
AACACTAACG ACGAAAATTC AACTCATCAA CAAGCAGAAA TGAAAAAAAC AAACAAATCA
AAATCTACTG ATATCTATTT TGCAGGAGGT TGCTTCTGGG GCACCGAACA CTTCTTTAAA
CAAATTCGCG GAGTTCTCGC CACCGAAGTA GGCTATGCTA ATGGCAAACT CTCCAAAGCC
CCCAGTTACG AACAAGTAAG TACAGGCAAT ACAGGTTTTG CCGAAACCGT AAAAGTAACC
TACAACCCTC AACTCATCAA CCTCAACCAA CTGCTCGACC TCTATTTCAA AATCATCGAC
CCCACTTCTC TCAACAAACA AGGCAACGAC CGTGGCACCC AATACCGCAC AGGTATCTAT
TACGTAAACG AAACCGAAAA ACCGCTTATC GACAAAGCTA TTGCCACACT TGCCACACAA
TACAGTAAAC CCATAGTAGT AGAAGTGCTC CCTTTAAAGA ATTTTTATAA AGCCGAAGAA
TATCATCAGG CGTATTTAGA TAAGAATCCG CAAGGTTACT GCCATATTTC ACCAGCCTTG
TTTGAAATAG CCCGCAAAGC CAATCCAGTC AAACAGAAAG GCTTTAAAAA GCCTTCCCAA
GCCGACCTTC GTAAGCAACT CACCCCCGAG CAATACGCCG TTACCCAAGA AAGCGCTACC
GAGCGCCCAT TTGCCAATGC CTATTACAAC GAGTTCCGCG AAGGTATTTA TGTGGATATT
ACCACCGGCG AACCCCTCTT TATCTCTACC GATAAGTTCG AATCAGGCTG TGGCTGGCCA
AGTTTCTCTA AACCTATTGA TAAAAAACTC ATAGAAGAAA AAACCGATAA ATCTCATAAT
ATGACTCGTA CCGAAGTGCG CAGTAAGTTA GGCAACGCAC ATCTCGGTCA CGTTTTTAAC
GATGGACCTA AGGATAAAGG AGGCTTGCGC TATTGTATCA ACAGTGCCTC ATTGCGCTTT
ATCCCCAAAG CCGATATGGA AAAAGAAGGT TATGGCAAAT ATATATCCCT CTTAGAGAAA
AAAACTAAAA AATAA
|
|---|
| Protein sequence | MAIAFTTGCA NGNSQRTTPL NTNDENSTHQ QAEMKKTNKS KSTDIYFAGG CFWGTEHFFK
QIRGVLATEV GYANGKLSKA PSYEQVSTGN TGFAETVKVT YNPQLINLNQ LLDLYFKIID
PTSLNKQGND RGTQYRTGIY YVNETEKPLI DKAIATLATQ YSKPIVVEVL PLKNFYKAEE
YHQAYLDKNP QGYCHISPAL FEIARKANPV KQKGFKKPSQ ADLRKQLTPE QYAVTQESAT
ERPFANAYYN EFREGIYVDI TTGEPLFIST DKFESGCGWP SFSKPIDKKL IEEKTDKSHN
MTRTEVRSKL GNAHLGHVFN DGPKDKGGLR YCINSASLRF IPKADMEKEG YGKYISLLEK
KTKK
|
|---|
| |