| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1022 |
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| Symbol | |
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| ID | 8367442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1205768 |
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| End bp | 1209052 |
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| Gene Length | 3285 bp |
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| Protein Length | 1094 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983448 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141138 |
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| Protein GI | 256819859 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0353971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAT TACATTCATA CAAAACCAAA CTACTGATGC TCGCTTGGCT GTTCGGGCTA
TGCGTAGGAG CACAATCCCT GTTTGCCCAA ACAGTAAAAG GGAAAGTAGT TGATGAAGAC
AATATGCCTC TGATGGGTGC TACCGTATTG GAAGTAGGTA CTAAAAACGG CGTAACCTCC
GATTTCGACG GTAACTTCCA ACTCAGCTTG AAGAACGGAA ATGCTACCTT AGAGATATCC
TTTATGGGAT ATAAGAGTAC CAAAGTACAG GTGCAAAACC GCAACAGCAT CACCGTAAAG
CTATTGCCCG AAACCACCGA ACTAAAAGAA GTGGTGGTGG TGGGGTATGG TACCCAAAAG
AAGGAAACCG TAACAGGTGC TATTTCTTCT GTCAAAGGAA ATAAACTCGT AGAAAATGCA
GTTGCCAACG TCTCCAATGC GCTGGTTGGG CGTATGCCAG GGATTACTTC CACTCAGTCC
AGTGGTGAGC CTGGTAGGAA CGCTACTACC ATTCGTATTC GCGGGGTGAG TACCTTCAAT
GCAAGTAGCC AAGAACCTTT GGTAGTGGTA GATGGTATCC AAAGCTCTAT GAATGCCGTA
AATGCGATGG ACCCTTACGA AATTGAAAGT ATTAACTTAC TGAAAGACGC TTCGGCAACA
GCTGTCTATG GTGTGAAAGG AGCTAATGGG GTGGTGGTAG TAACTACCAA AAGAGGTCGC
TCTGGCGCTC CTAAGGTGAG TCTTACTTAT AACTTTGGTA TGAGTCAGCT GGCTACTCAG
TTAGACCTGC TCAGTTCTTA TGATTATGCG CGTTTCCGCA ACGAAGCTAT TCGCAATGAC
AACGACCCAA GTAACTTCGA TAAGCTGTTC AGTGAAAGTG GTTTTCACAA CGAGTTGTGG
AAGTTCAAGA ACAATCGCGA CTATACGCCT CAAGAGGTGG AAGCGATGAA CCTCACTCCT
GAACAAAAAC AAGCCCTGCT AAATAGCCCT GCGCTGTATT ACACAAGTCA TAACTATTTC
AAAGAAGCTT TTGGCGGGGT ATCTCCTCAA ACGCAATTCA ACCTAAACGT ATCAGGGGGA
AGTGAGAAAA CGCGTTACTT TACTTCTTTG GGATATTTCT ATCAAGGAGG TACTTTCAAA
GAAACTAACT ACCACAACGC CGATGTAAAC TCTAAATATC AGCGTTACAA CTTCCGCTCT
AACTTCGATT TTGAACTTAC CGATCGTACC AACCTCACGC TCGACCTTGC TGCTGTATCT
TCAAAGGTAG GAGGTATTTT AGGTAGTGAG CAAGACGGCG ATGTAAACAG CGAAACAGCC
CGCAAAAAGT CGATGTTAGT GCATATCTTG GCTAATACGC CTTTTGCAGG TCCTGGTATT
GTAGATGGAC GTTTAATCGA TGGATATGTA GATGGTGTAA ATCCTTTAGT AGGCAAAGGA
GGTACAGGTT ATTCCGTATT GTCCAGTTTG CTCTGGCGAC CTTACCTTAC TACCTATCAA
ACCGACTTGA ACCTAAACTT AAAACTGAAA CACAAACTCG ATTATATCAC TCAGGGGCTT
TCTATTTCAG GTACTTTTTC TTACAACGAT TTGTATAGAA AAGGTGTGAA AAGAGAACGC
TCTATCCCTT CGTATAGCGT AACTCGCAAC CCTAAAAACC CTGCTGAACT ACTCTTCTTT
GGCGGCAGAC TCAAACACAC TACCCTTACC GACCGCTTTA AGTCAAGCAA GTGGCGTCGC
CTTTATTTTG AAGTAGCTAC TAACTACGAC CGCTCTTTCG GAAAACACAA TATCACTGCC
TTACTTTTGG CTAACGGACA AAAAACGTAT GACCCTGGTT TTGAGTTCAA CGTACCTGCT
GGTATTATGG GGCTCGCCGG TAGGGTTACT TACGATTACG ACCGCCGTTA TCTTATTGAA
GGCAATATGG GGTATAATGG TACCGAAAAC TTCGCTCCTG GCAAACGCTT CGGGTTCTTC
CCTGCCTTCT CATTGGGTTG GGTAGTTACT AACGAAAAGT TCTTCCCTAA AAACAATATT
CTCACCTATC TAAAACTGAG AGGTTCTTAT GGCGAAGTAG GGAATGACCA AGTAGGTGGT
CGCCGTTTTT TATACTTGCC AAGTACTTGG GGCTACGGCT ATGAAGGCTA CCGCAACGAT
GGTTATGGTG CAGGAGGTTA CTATTTCGGC AGTAGTGATG GTACTACCAA AGACCCTTTC
TATACTGGTG CTTGGGAAAC GCGTGTTGGG AACCCCAATG TTACTTGGGA ACGCGCCAAA
AAAAGCAATG CAGGTATCGA CTTGAATATG TTTAAAGATA GGCTTACCAT CAATGCCGAT
GTATTCCAAG AAAAACGCGA TAACATCTTG TGGAACAGAG GTACAGTGCC TGGTATTGTA
GGTTCTGACC TTCCTGCGAG CAATATAGGT AAAGTAACCA ATAAAGGTTA TGAAGTACAA
GTGCACTGGG GCGACAAGAT AGGCGAGTTT ACTTATGGCA TCGGGGGGAA TGTATCCTAT
GCCAAAAACA AAATAGACTA CCGCGATGAG CCTAACAATC CTCACCCTTG GATGAATGAA
ACAGGCTATT CTATCGGGCA GTACAGAGGT TATCTCACCA ATGGTTTCTA CAACACTTGG
CAAGAGGTAA TGCAACGCCC TTATTCGCGT TTTGATGGCA ATAAAGTGCA ACCTGGTGAT
CTCCGTTATG TAGATGTGAA TGGCGATGGC GTTATCGACG AGAAAGACCG CGTGCCTATT
GGTTATGCAA ACTTCCCTCG CTATACTTTT GGGGCAAACC TCAATGTAGG TTACAAAGGA
TTTGAAATAT CAGTGTTATT CACCGGTACA GCACAAGGTT CTATGCCTTT GGATTTCTAT
ACGCGCAACC CTTTCTATAT GGGTACAGGG GCTGCTTTCC AACATCAGTA CGACGGACGT
TGGACTCCCG AAAAAGCTCA AAACGGCATT ACCCCTACTT TCCCACGTGC TTCTATGCGC
ACCGGTGATA ATATCAACGG CTTGTTTAGC GACTTCTGGT TGCTCTCTAC CGACCATATC
AAGCTGAAAA ACATAGAAGT AAGTTATCTT TTGCAAAAGA AAATGTGGTT GGATAAAGCA
GGTATCTCAT CGGTGAAACT ATCGGTGAGT GGTAACAACC TCTATACGTG GTCTAAAATG
CACGATGGTT ACGACCCCGA ACAACAAGAT TCTAACGGCG CTGCCTCTGG ATATCTCTAC
CCTATGACCC GCACTTATAG CGTAGGGCTC AACGTTCAAT TTTAA
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| Protein sequence | MDRLHSYKTK LLMLAWLFGL CVGAQSLFAQ TVKGKVVDED NMPLMGATVL EVGTKNGVTS
DFDGNFQLSL KNGNATLEIS FMGYKSTKVQ VQNRNSITVK LLPETTELKE VVVVGYGTQK
KETVTGAISS VKGNKLVENA VANVSNALVG RMPGITSTQS SGEPGRNATT IRIRGVSTFN
ASSQEPLVVV DGIQSSMNAV NAMDPYEIES INLLKDASAT AVYGVKGANG VVVVTTKRGR
SGAPKVSLTY NFGMSQLATQ LDLLSSYDYA RFRNEAIRND NDPSNFDKLF SESGFHNELW
KFKNNRDYTP QEVEAMNLTP EQKQALLNSP ALYYTSHNYF KEAFGGVSPQ TQFNLNVSGG
SEKTRYFTSL GYFYQGGTFK ETNYHNADVN SKYQRYNFRS NFDFELTDRT NLTLDLAAVS
SKVGGILGSE QDGDVNSETA RKKSMLVHIL ANTPFAGPGI VDGRLIDGYV DGVNPLVGKG
GTGYSVLSSL LWRPYLTTYQ TDLNLNLKLK HKLDYITQGL SISGTFSYND LYRKGVKRER
SIPSYSVTRN PKNPAELLFF GGRLKHTTLT DRFKSSKWRR LYFEVATNYD RSFGKHNITA
LLLANGQKTY DPGFEFNVPA GIMGLAGRVT YDYDRRYLIE GNMGYNGTEN FAPGKRFGFF
PAFSLGWVVT NEKFFPKNNI LTYLKLRGSY GEVGNDQVGG RRFLYLPSTW GYGYEGYRND
GYGAGGYYFG SSDGTTKDPF YTGAWETRVG NPNVTWERAK KSNAGIDLNM FKDRLTINAD
VFQEKRDNIL WNRGTVPGIV GSDLPASNIG KVTNKGYEVQ VHWGDKIGEF TYGIGGNVSY
AKNKIDYRDE PNNPHPWMNE TGYSIGQYRG YLTNGFYNTW QEVMQRPYSR FDGNKVQPGD
LRYVDVNGDG VIDEKDRVPI GYANFPRYTF GANLNVGYKG FEISVLFTGT AQGSMPLDFY
TRNPFYMGTG AAFQHQYDGR WTPEKAQNGI TPTFPRASMR TGDNINGLFS DFWLLSTDHI
KLKNIEVSYL LQKKMWLDKA GISSVKLSVS GNNLYTWSKM HDGYDPEQQD SNGAASGYLY
PMTRTYSVGL NVQF
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