Gene Coch_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0724 
Symbol 
ID8367141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp879258 
End bp880220 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content44% 
IMG OID644983150 
Producttranslation elongation factor Ts 
Protein accessionYP_003140842 
Protein GI256819563 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA TTACCGCCGC AGACGTAAAT AAACTCCGCC AAGCTACCGG CGCAGGTATG 
ATGGACTGTA AAGCTGCCCT CATCGAAGCC GAAGGCGATT TCGATAAAGC AATTGAAGTA
TTGCGCAAAA AAGGTCAGAA AGTAGCTGCT AAACGCGCTG ACCGCGATTC TAAAGAAGGG
GCTGCTATCG CTCAAGTAAA TGCTAACCAC ACTGTAGGTG CTATCATCTC TCTCAACTGT
GAGACCGACT TCGTAGCTAA AAACGCCGAT TTCGTAGCCC TTGCTAAAGA TTTAGCTGAT
CTCGCTCTTA CTGTAAATAG CAAAGACGAA CTTCTTGCCC TTAACTACAA AGGCATTACC
GTAGCCGAAA AACTCCTCGA ACAAACAGGC GTTATCGGTG AGAAAATAGA ACTCGGTGCT
TTCGAAAAAG TAGAAGCTCC TTTCGTAGGT TCTTATATTC ACCACGGCAA CAAAATCGCT
GCAATCGTAG GCTTATCAGC TGCAATCGCT GATGCTACCG AAGTAGGTAA AAACTTGGCA
ATGCAAATCG CTGCTATGGG TGCTGAAACT CTTTCTTACA AAGATTTCTC TCCTGAGTAC
ATCGCTAAAG AAACTGAAGC ACGCATCGCT ATTATCGAAA AAGAAAACGA AGAGCTACAC
CGCTTGGGCA AACCGCTCAA ACACGTACCT CAATACGTTT CACAAGCGCA ACTCACTCCC
GAAGTATTAG CTAAAGCTGA AGCCGATGCT AAAGCTGAAT TGAAAGCTGA AGGTAAACCA
GAACAAATTT GGGATAAAAT CCTTCCTGGT AAGATGCAAC GCTTCATCTC CGATAACACT
ACCCTCGACC AAGAGAAAGC TCTCCTCGAC CAAGTGTACA TCTACGATGA AAGTAAAAAA
GTATCCGATT TTGTAAAATC TAAAAATGTA GAGATTACAG CTTTCAAACG CGTAGCCTTG
TAA
 
Protein sequence
MANITAADVN KLRQATGAGM MDCKAALIEA EGDFDKAIEV LRKKGQKVAA KRADRDSKEG 
AAIAQVNANH TVGAIISLNC ETDFVAKNAD FVALAKDLAD LALTVNSKDE LLALNYKGIT
VAEKLLEQTG VIGEKIELGA FEKVEAPFVG SYIHHGNKIA AIVGLSAAIA DATEVGKNLA
MQIAAMGAET LSYKDFSPEY IAKETEARIA IIEKENEELH RLGKPLKHVP QYVSQAQLTP
EVLAKAEADA KAELKAEGKP EQIWDKILPG KMQRFISDNT TLDQEKALLD QVYIYDESKK
VSDFVKSKNV EITAFKRVAL