| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0578 |
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| Symbol | |
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| ID | 8366995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 728128 |
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| End bp | 730839 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983005 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003140697 |
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| Protein GI | 256819418 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGGA AATTATATCT TTATGTGCTA TTGTTCGTAT CGGTTTCGGC GTTTTCGCAA
GTGAAAGTGG AAGGAACAGT GATAGATGAA CTAAGTAGCA AGCCTTTGCA AGGGGTAAAA
GTGCGTGTGA GCACTTCTCC GCGCGAAGCA GTTACCAATA GTAAAGGTAA GTATACGCTT
CAATTGCCAG AAGGGGAACA CTTGCTACTC TTCTCCCTTA GTGGTTATAG CAGTGCTGAG
CAACTCATTT CATTAGGAGA CACTCATCCT TACACCGTGC CTACGGTTTC CCTCTCGGGT
GACTATCAGC AGGAAGCTGA GCAATTGGCA GTGATTACTG AAAGCGAACT AGAAGACGAC
GAAAGTGGTG CTGATGCGAT GTCGGGACTT TTGCAAAGTT CACAAGACGT GTTTATGCGT
AGGGCGGCTT TTGATTTCAG TTCGGTGTTC TTCAAACCTC GTGGTTATGA CTCCAAAGAC
GTAACGGTGC TCATTAACGG TATCCCGATG AACCGACTTG AAAACGGTCG TGCTCAATGG
GCGAATTGGG GAGGGCTTAA CGACATCACT CGCAACCAAG AAATGAGCAA CGGATTGGTA
AAATCCGACT ATACTTTTGG TGGATTGATG GGCTCTAACT ACATCAATAT ACGTCCGTCG
CTTAACCGTG CAGGACTTCG CGTAACGACT TCAGCCAGCA ACCGCAGTTA TACTGGTAGA
CTGATGGCTA CTTACAACTC GGGTGTACAG CGCAACGGAT TGGCGTATAT GGTTTCGGCT
TCACGCAGGT TTGCGCCTCA GGGTAGTTGG GTAGACGGTA CGCTCTACAA CGCTTATGCT
TTTGCAGCAG GAATAGAATA TCAGCTTAAT AATCATAGTA GCTTTAACCT TATAGGAATG
TTTTCGCCGG TGAAGCGCGG TAAGACCTCG CCACTGACTC GTGAGGTACT CGATTTGATG
GGCTACCAAT ACAATCCTTT TTGGGGTAAA CAAAATGGCG ACAAGCGCAA TTCGCGTAAC
CGTATCGTTT CAGAGCCTAT CTTCGTGTTC TCTTATAACT ATTTGAAAAA CGACACGCGC
CTGAATGTGG ACTTGGGCTA TCAGTTTGGT GAAATAGGTA ATACGCGTAT TAGTTATTCG
AATGCTCAAA ATCCTGAGCC TAATTACTAT AAACTTCTGC CAAGTTATTA CTTAAACCAA
AACCCTTCTG ACGAAACGAT GGCAGCCTTA CAGAAAGACT ATTTCTTAAC GCATTCGCAA
CTGGACTGGG AAGAGCTTTA TCGGGCGAAC TACAACACTA CCGATAAGCG CAGTGCTTTT
ATTGTGAGCA ATGATATCAA TCGCGAACGC ACGTTCTCAG CCAATGTGAA CTTTTCTACG
CCTATTCACG AAAACATCAA ATGGACATCG GGTGTAGTGT ACCGCAATGT TTCTTCCGAT
AACTTTGCTG AAGTAGACGA TTTGCTTGGC GGTGATTACT TTATGAACTA CGATTACTTT
GAAGGAAAGC CTTACAATGC CGATGAAACA GATATGAAGA AAAAGGAAGG CGACAAGTGG
AATTACTTTT ATGCGCTTAA AAGCAATGTA GCCGAAGTTT TCTCGCAGTT TGAATTTACG
TTTAAAAACG TCGAGTTATT TGTAGCAGGA CGTTACCATT ATACTGATAT CCAACGCGAA
GGTAAGTTCA ACTATCCTCT CTATGCTGAT TCTTACGGAA AGGGTGCTAT GCAAGTGCAA
AACGGAATGA GTACCAAAGC TGGACTTACC TACGCACTTA CCGGTCGCCA TTTGTTACAA
GCGAACGTGG GGTATTTTAA TACACCACAA TCGGTGCGCA ATATCTATGC AAATGTGCGC
AATTCTAATC GCTTGTTGCC TAATATCAAG AACGAATTGG CTTACACTGC CGATGCGAGT
TATATTTTGC GTATGCCTTA CCTAAAAGGA CGCCTTACAG GGTTCTTTAC CGAGATAGAG
AATACCGCAG AGACAAACTT CTTCTATACT GAAACGGCTC TTACTGATGA AATAGACAGA
GACTTTGTGG CTCAAACGGT AGAAGGCATC AAGAAGCGCC ATTTTGGGTT GGAGTTTGGA
GCGGAAGCAC AACTTATACC TACTCTTAAA CTTACGGCAG TAGCTTCGGT AGGACAATAT
ACTTACATCA ATAATCCGTC GCTTTACATT TCATCAGGAG AGGTGAACAA AGCTATTGAT
GAGGTAACGA TGAAGAATTA CCACGTGCCC AGCGGTCCGC AACAAGCCTA TTCATTAGGT
TTGGAATATC GCCACCCTAA GTATTGGTGG ATAGGAGCAA CGGCTAATTT CTTGGCACAA
AACTACGTAT CGTTATCGGC TTTGAACCGC ACTTCGCAGT TTTTTATAGA CCCGACCACA
AAAGCGCCTT TTACTAATAT TGATACTGAC TTAGCTCGGA AGCTTCTCAA ACAAGAACGT
TTAGACGATG TATTCTTGGT AAATCTTGTG GGTGGTAAGT CGTGGAGACT CAACAAAACC
TATGTAAGCC TAATGGTGAG TGTGAATAAC TTGTTTGACA CTCAATTCCT TTCAGGAGGT
TTTGAGCAAT CGCGTACTGC CAATTATGGC AAGATGGTAC AGGATAACGC ACAAGGCGTA
CCTTCGTTTG GCAATCGTTA CTTTGTGGGT TACGGACGTA CTTATATGGT GAACTTAGCG
GTGAGCCTTT GA
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| Protein sequence | MLRKLYLYVL LFVSVSAFSQ VKVEGTVIDE LSSKPLQGVK VRVSTSPREA VTNSKGKYTL
QLPEGEHLLL FSLSGYSSAE QLISLGDTHP YTVPTVSLSG DYQQEAEQLA VITESELEDD
ESGADAMSGL LQSSQDVFMR RAAFDFSSVF FKPRGYDSKD VTVLINGIPM NRLENGRAQW
ANWGGLNDIT RNQEMSNGLV KSDYTFGGLM GSNYINIRPS LNRAGLRVTT SASNRSYTGR
LMATYNSGVQ RNGLAYMVSA SRRFAPQGSW VDGTLYNAYA FAAGIEYQLN NHSSFNLIGM
FSPVKRGKTS PLTREVLDLM GYQYNPFWGK QNGDKRNSRN RIVSEPIFVF SYNYLKNDTR
LNVDLGYQFG EIGNTRISYS NAQNPEPNYY KLLPSYYLNQ NPSDETMAAL QKDYFLTHSQ
LDWEELYRAN YNTTDKRSAF IVSNDINRER TFSANVNFST PIHENIKWTS GVVYRNVSSD
NFAEVDDLLG GDYFMNYDYF EGKPYNADET DMKKKEGDKW NYFYALKSNV AEVFSQFEFT
FKNVELFVAG RYHYTDIQRE GKFNYPLYAD SYGKGAMQVQ NGMSTKAGLT YALTGRHLLQ
ANVGYFNTPQ SVRNIYANVR NSNRLLPNIK NELAYTADAS YILRMPYLKG RLTGFFTEIE
NTAETNFFYT ETALTDEIDR DFVAQTVEGI KKRHFGLEFG AEAQLIPTLK LTAVASVGQY
TYINNPSLYI SSGEVNKAID EVTMKNYHVP SGPQQAYSLG LEYRHPKYWW IGATANFLAQ
NYVSLSALNR TSQFFIDPTT KAPFTNIDTD LARKLLKQER LDDVFLVNLV GGKSWRLNKT
YVSLMVSVNN LFDTQFLSGG FEQSRTANYG KMVQDNAQGV PSFGNRYFVG YGRTYMVNLA
VSL
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