Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1906 |
Symbol | |
ID | 5708542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1982723 |
End bp | 1982890 |
Gene Length | 168 bp |
Protein Length | 55 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641276414 |
Product | 30S ribosomal protein S30e |
Protein accession | YP_001541713 |
Protein GI | 159042461 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4919] Ribosomal protein S30 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000323387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTCCAAGCC ACGGCAGCCT TACCAAGGCA GGTAAAGTTA GGAGCCAGAC ACCTAAGATT CCCGCCAAGC CTAGGAGGAG TCCTGTTCCT AGGTTAAGGA ATTGGCGTAA TTATAGGCGT AGAGTGCTTT TTGCTGAACG CAGCCAGAGT CAGGGAGTTA GTGGTTAA
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Protein sequence | MPSHGSLTKA GKVRSQTPKI PAKPRRSPVP RLRNWRNYRR RVLFAERSQS QGVSG
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