| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1898 |
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| Symbol | alaS |
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| ID | 5709981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1974743 |
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| End bp | 1977442 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641276406 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001541705 |
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| Protein GI | 159042453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0295948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTATAC TTAATGAGAG TCTACTTAGG ACTAGGATAT TCATAGGTAG GGGGTTTAGG
AGGAGTAGGT GCCCGTACTG CGGCCACCAC TACTGGACGC TTAATCCGAG TCAAGATAAT
TGCGGTGACC AACCCTGCAC ACCATACGGC TTCATAGGTA ACCCACCGGG AACATATAGG
CCTGAGTCAA TTAAGGATGT TAGGGAACGT TTCCTATCAT TCTTCGAGAA GAGGGGGCAC
ACTAGGGTGG CTAGGTATCC TGTGGTTGCC AGGTGGAGGA ATGACGTTTA CCTAGTCGGC
GCCTCAATAT ATGACTTCCA GCCCTGGGTC ACTGAGGGCG TAGTACCACC GCCGGCTAAC
CCACTTACAA TATCTCAACC AAGTATAAGG CTTACTGACG TGGATAAGGT TGGTAGAAGT
GGTAGGCATT TAACTGGTTT TGAAATGATG GCTCACCACG CCTTCAACTT CCCCGGTAAG
GAGATTTACT GGATTAATGA GACAGTGGAG TATGCTCACG AATTCTTCAC AAGGGAACTG
GGTTTCAGGG ATGATGAGGT GACTTATAAG GAGAACATAT GGGAGGGTGG AGGCAATGCC
GGTGAATCCT TCGAAGTCCT GGTTAGAGGA CTTGAATTAG CTACATTAGT CTTCATGCAC
TATAGGGTGA TTGGGGATGA GTATAGGGAA ATGCCCATTA GGATCGTGGA CACTGGTTAC
GGTCTTGAAA GAATATACTG GGTTTTAACA GGTAAGCCAA CGATTTATGA GGCTGTATTC
GAGGGTTTCC TCAATAAGGC TAGGCAACTC CTCGGTTTAC CTAAGCCTGA TGAGAAGGTT
CTTGCCTCAT TAGCCATACA CATGGGTCAA CTTGATCCTG AGGTCCTGGC GCTTGATAAA
GCCTACGTTG AGGTGGCTAA GAGGATAGGG ATTGATTCAA GCGAGTTAAT TAACTTCATT
AAGCCTCAGG AGGCGTTATA CGTGCTTGCT GATCATTCAA GGACAGTGTC CTGGATGATT
AATGATGGTG TAATACCATC CAACTCAGGT GTAGGGTACT TGGCCAGGTT ACTCATAAGG
AGGATGCTTA AGTACATGCA TGTTATCGGT GCCCAAGTTC CATTAACTGA AATCTTCAAC
ACGCATCTCA ATTACCTAAT TAATGATTAC CCCGAGTTAA AGGAGAGCAT GCAGTTAATA
CTAGACTTGG TTGATTTAGA GGAGGCTAAG TATAAGTCCG CTATTAGTCA ATTACCTAAA
TTAATAAGCA GAATTAAGGG TGAATTAACT ATTAATGACC TCATAAACCT ATACGACTCC
CACGGCATAC CCCCTGAGGT TGTTAGGGAT GAGGCAGCTA AGAGGGGGGT GAAGGTTAAT
GTTCCAGATA ACTTCTATGA AATGCTAGCT GCCAGGCATC AGAAGCCAGC TAAGGGTGAG
GAGGGTAATA GGCTTGATGT AACAGCGGAT GATGTAATAG ACCTACCACC CACTAGGGAA
TTATTCTATG AGGATACCTA CGCATTTGAG GGTAAGGCTA AGGTGTTGAA GGTTATTAAA
GGTAAGTACA TTGTACTTGA CTCAACAATA TTCTACCCAG AGGGTGGTGG TCAACCAGCC
GATAGAGGTG TGTTGAGGTT TAATGGCGTT GAGGCTAAGG TTGTGGACGT GCAGAGGGTT
GGGCCAGTGA TAGTGCATGT GATTGATGGA CCAACCCCAG GGGTTGGTGA TGTGGTTGAG
ATGAGGATTG ACTCGGAAAG GAGGCTTGGC TTAATGAGAA TGCACACTGG TACCCATATA
CTGCTTCAAA GCATAAGAAG GGTTCTGGGT AAGCATGTTT GGCAGGCAGG TGCTCAGAAG
GATATACCGT TAAGTAGGCT TGATGTAACC CACTATAGGT TACCGACCCC AGATGAGGTT
AAGAGGATTG AGGAGTTAGC CAATGAAGTG GTTTTAAGCG ACCTACCGGT TAAGGCTGAG
TTAATGCCGA GGAATGAGGC TGAGGCTAAG TACGGCTTCA TAATATACCA AGGCGGCGTG
GTACCGGGTG GTGAGGTTAG GATTGTTAAG GTGGGTGAAG GTAATGATAC GTATGATGTT
GAGGCATGTG GAGGCACTCA CCTGGATAGG ACAAGTAGGA TTGGTTTAAT TAAGATTGTT
AAGGTTGATA AGATACAGGA GGGCGTAATT AGGTTCATCT TCACCACGGG AAAGTACGCG
CTTGACTATG TTAGGAACCT GGAGGGTAAG CTTGATTCAG CAGCCAGTAA ACTGAGGGTT
GGTAGGGATG AGGTTGATGA GGCGGTGGAT AGGTTAATTA AGGAGCTTAA TAATGCTGAG
GAGAGGAGTA GGGTATTGGC TAGAAAGGCT ATTGAGGCTG ATTTAGCAAA CATAGTGAAG
TCAATGATCA CGGTGAGTGG ATTCAAGGTT GCTGTATATT ATGAGGATTA CTGGGTTAGG
GATTACCTGC AGGAATTAGC CAGTAAGTAC CCAGGGGACG TATTGGTATT AATCCATGGT
AATGAATACC AAGTATACAC TAATGGTAAG GTTAAGGCCA TTGATGTGGC TAAGGTGTTG
AATGAATTAG GAGGGAAGGG TGGTGGCAGT GGTACATTTG CGCAGGGGGT TTTCAACAAC
CCAGTTAAGC AGGATGACGT GGTTAACACC ATTAAGCGTA AGTTAACTTT AACTCAATAA
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| Protein sequence | MPILNESLLR TRIFIGRGFR RSRCPYCGHH YWTLNPSQDN CGDQPCTPYG FIGNPPGTYR
PESIKDVRER FLSFFEKRGH TRVARYPVVA RWRNDVYLVG ASIYDFQPWV TEGVVPPPAN
PLTISQPSIR LTDVDKVGRS GRHLTGFEMM AHHAFNFPGK EIYWINETVE YAHEFFTREL
GFRDDEVTYK ENIWEGGGNA GESFEVLVRG LELATLVFMH YRVIGDEYRE MPIRIVDTGY
GLERIYWVLT GKPTIYEAVF EGFLNKARQL LGLPKPDEKV LASLAIHMGQ LDPEVLALDK
AYVEVAKRIG IDSSELINFI KPQEALYVLA DHSRTVSWMI NDGVIPSNSG VGYLARLLIR
RMLKYMHVIG AQVPLTEIFN THLNYLINDY PELKESMQLI LDLVDLEEAK YKSAISQLPK
LISRIKGELT INDLINLYDS HGIPPEVVRD EAAKRGVKVN VPDNFYEMLA ARHQKPAKGE
EGNRLDVTAD DVIDLPPTRE LFYEDTYAFE GKAKVLKVIK GKYIVLDSTI FYPEGGGQPA
DRGVLRFNGV EAKVVDVQRV GPVIVHVIDG PTPGVGDVVE MRIDSERRLG LMRMHTGTHI
LLQSIRRVLG KHVWQAGAQK DIPLSRLDVT HYRLPTPDEV KRIEELANEV VLSDLPVKAE
LMPRNEAEAK YGFIIYQGGV VPGGEVRIVK VGEGNDTYDV EACGGTHLDR TSRIGLIKIV
KVDKIQEGVI RFIFTTGKYA LDYVRNLEGK LDSAASKLRV GRDEVDEAVD RLIKELNNAE
ERSRVLARKA IEADLANIVK SMITVSGFKV AVYYEDYWVR DYLQELASKY PGDVLVLIHG
NEYQVYTNGK VKAIDVAKVL NELGGKGGGS GTFAQGVFNN PVKQDDVVNT IKRKLTLTQ
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